Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00288 ATGGCTCTAGCTTCTACTCCAAAAGTATTACTCGGCTCAGTTGCCTTTGCAATCTTCTGGGTACTGGCAGTGTTTCCTGCCGTGCCATTTATGCCAGTTGGGAGGACTGCCGGGGCCCTGCTAGGAGCCATGCTAATGGTCACATTTCGTGTTATAGCTCCAGATCAAGCTTATGCTGCAATTGATCTGCCTATTCTCGGCCTTCTTTTCGGTACAATGGTTGTCAGTGTATATCTTGAAAGAGCAGACATGTTTAAATACTTAGGCAAGTTGCTGTCATGGAAAAGTAGAGGTGCCAAGGATTTGCTTTGTCGAATTTGTCTGATATCTGCTATATCAAGTGCTTTATTCACTAACGATACCTCTTGCGTTGTTCTAACTGAGTTTGTACTGAAAGTTGCAAGGCAGCACAATCTTCCACCTCATCCGTTCTTGCTTGCCCTTGCCTCTAGTGCAAACATTGGTTCCTCTGCCACTCCAATTGGTAATCCTCAAAATCTAGTTATAGCAGTGCAGAGCAAAATACCGTTTGGTGATTTTGTGACTGGAATTCTTCCAGCCATGATTGTAGGGATCTGTGTCAATGCTTTAATTCTCCTAGGCATGTATTGGAAGTTGCTTTCCATACATAAGGATGAAGAAGATGCAATTTCAGAAGTTGAGGCAGAGGAAGAAGTAAATTGTCACCGATTTTCACCAGCTACAATGTCACATGTCACATCCTTAAATTCAGAAGAGTGGAACTCTGATAGTATTATTGGCCACACTACATACACTGACACTCTGAGAAATCGATCTAGTGCAAACGAGAATGAGATCAATAGGACCCCCAGTGGCAGACTTGATTCCATGACAAATCATGATGCATCAAAGGAGTTGTCAAGAGAAGCTACTTTTATACAGTCTTCGGAAGAAAAGGAGGACTTGACCTCTAGATGGAAGCGGATAATATGGAAATCATGTGTTTATATTGTTACTATTGGAATGTTAATCGCATTGCTTTTTGGTTTGAACATGTCTTGGACGGCAATTACAGCAGCACTCGCACTTGTAGTTCTTGATTTCAAGGATGCAAGGCCAAGCCTAGAAAAGGTCTCCTATTCACTTTTGATTTTCTTTTGTGGAATGTTTATCACAGTTGATGGCTTCAACAGAACTGGAATCCCCAGTGCTTTATGGGAATTAATGGAGCCTTATGCTCAAATAGATCATGCGAGTGGGATAGCAGTCCTCGCTCTTGTCATACTTGTCCTGTCAAATTTGGCTTCAAATGTGCCGACTGGTATGTTGATTTTCTACTTCTTAGGCCATTTGATTATGTTTATCTTCATCCTGACGCGCACCTGA 1347 0.4209 MALASTPKVLLGSVAFAIFWVLAVFPAVPFMPVGRTAGALLGAMLMVTFRVIAPDQAYAAIDLPILGLLFGTMVVSVYLERADMFKYLGKLLSWKSRGAKDLLCRICLISAISSALFTNDTSCVVLTEFVLKVARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKIPFGDFVTGILPAMIVGICVNALILLGMYWKLLSIHKDEEDAISEVEAEEEVNCHRFSPATMSHVTSLNSEEWNSDSIIGHTTYTDTLRNRSSANENEINRTPSGRLDSMTNHDASKELSREATFIQSSEEKEDLTSRWKRIIWKSCVYIVTIGMLIALLFGLNMSWTAITAALALVVLDFKDARPSLEKVSYSLLIFFCGMFITVDGFNRTGIPSALWELMEPYAQIDHASGIAVLALVILVLSNLASNVPTGMLIFYFLGHLIMFIFILTRT* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00288 448 Pfam Citrate transporter 28 432 IPR004680 GO:0016020|GO:0055085
Pte16g00288 448 PANTHER TRANSPORTER ARSB-RELATED 1 430 - -
Pte16g00288 448 CDD YbiR_permease 28 438 - -
Pte16g00288 448 MobiDBLite consensus disorder prediction 264 284 - -
Pte16g00288 448 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00288 Pte-Chr16 3801778 3805531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00288 - - qsa:O6P43_008181 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00288 16 3801778 3805531 Pte9g00355 9 4199412 4200991 RCT
Pte16g00288 16 3801778 3805531 Pte16g00288 16 3801778 3805531 RCT