Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00287 ATGGCAGTTGTCAAGCCTGAGATGAAGTCCTACATCTGGCTTCAAACTGCTGATGGTTCTATTCAACAAGTAGAAGAAGAGGTTGCAATGTTCTGCCCAATGATATGCCATGAAATTCTTCAGACTGGCATGGGATCTTCAAAAAACTATGCTATATCTCTTCCTGAACGGGTCAATCCTGTAACCTTGGGCTTAATACTTGATTATTGTCGGTTCCATCAAGTACCAGGGCACTCTAATAAAGAACGCAAGAATTATGATGAGAAGTTTATTCGGATGGATACTAAAAGGTTATGTGAGTTGACATCTGCTGCTGATAGCATCCAGCTGAAACCTTTAGTTGACCTTACCAGTAGGGCACTTGCTCGAATGATTGAAGGCAAAACTCCTGAGGAGATTCGTGAAACATTCCATTTACCCGATGACCTAACTGAGGAGGAAAAATTGGAGCCCCTGAGAAACATAACAGATGATCCACGCATTCGACTTCTAAATCGTTTATATGCTAGAAAGAGGAAAGAGTTAAAAGAGAGACATAAATTGAAGAATGTTCAAGCAGAGGAAGAGCATGTGGATGAGCGTTCAGTTGATGATCTCTTGTCATTCATTAATGGTGGCGATCGAGATACAAAGGGAACTAGAACCACTAAAAATAAAAAGAAAAATCAGAGGAGAAAGGAACAAGGAAAATATTGTTCTCAAAACTATGCAAATGGAGTTCAGAATAAGGAGTCAGATCCCAGTCCTTTACCTTGTCATAATGGTGACACTGAAGTTGAAGGCGCTCCAAGTAAAACTTCAAACTCAGAATTTCTTGCTGATCTAAACTTCTCATCAAGAATTGATTTGATCGATGGTGACATCGATGACGATTTAGATCCTGCAATGAAGGAAGAACTCGACAGGGAAGTAGAGGATTTTGCACGAAGACTGAATTCAGATTGGCCAGAAAGGATGCAAGAAATTTTGTCTTCAAGCCAGGAGAGAAGATCTGCACCCCCATACTTAAATGGCAACGGATCTGTGCATAAACATACGAACCATAAACGGTTTGTAACTTCAATTGAATACACAGAAGATAGCAATTCAGAAGTTACATTCGTTGCATTGCCATTAAAAAGGGATCATGTGGTAAAGGATGGTCGAAATCATGAAACCATGGATTCGAGATATGATGGATGTGATAGACTGCTACGTAATGCAAGTTATTAA 1212 0.3977 MAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICHEILQTGMGSSKNYAISLPERVNPVTLGLILDYCRFHQVPGHSNKERKNYDEKFIRMDTKRLCELTSAADSIQLKPLVDLTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERHKLKNVQAEEEHVDERSVDDLLSFINGGDRDTKGTRTTKNKKKNQRRKEQGKYCSQNYANGVQNKESDPSPLPCHNGDTEVEGAPSKTSNSEFLADLNFSSRIDLIDGDIDDDLDPAMKEELDREVEDFARRLNSDWPERMQEILSSSQERRSAPPYLNGNGSVHKHTNHKRFVTSIEYTEDSNSEVTFVALPLKRDHVVKDGRNHETMDSRYDGCDRLLRNASY* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00287 403 PANTHER SKP1 8 149 IPR016897 GO:0006511
Pte16g00287 403 MobiDBLite consensus disorder prediction 322 344 - -
Pte16g00287 403 MobiDBLite consensus disorder prediction 201 266 - -
Pte16g00287 403 Pfam Skp1 family, dimerisation domain 111 148 IPR016072 GO:0006511
Pte16g00287 403 SUPERFAMILY POZ domain 10 74 IPR011333 -
Pte16g00287 403 Gene3D Potassium Channel Kv1.1; Chain A 5 155 IPR011333 -
Pte16g00287 403 FunFam SKP1-like protein 21 isoform X1 6 156 - -
Pte16g00287 403 SMART skp1_3 9 110 IPR001232 GO:0006511
Pte16g00287 403 MobiDBLite consensus disorder prediction 229 248 - -
Pte16g00287 403 SUPERFAMILY Skp1 dimerisation domain-like 84 152 IPR036296 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00287 Pte-Chr16 3789905 3795178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00287 - - qsa:O6P43_004280 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00287 16 3789905 3795178 Pte16g00287 16 3789905 3795178 RCT