Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00279 ATGGAGTCCCTCTGGAATCTCTTATATTTGCTAGAGGCTGCGCCAGTGACACTCGTTATTACAGCAGTAGTAGTAACATTTGCATCTGCTTTTCGAGCTCTTAATCATGGTAAAGAAATGGAAAGGAGTCGTGACCTATCAGAGGCATCCATTACATTAGATAGTTCGCAAGCTCTAATGATCCCTGTGATGAGTTCATTCAGCTTGCTTTTGATGTTCTACTTGTTCTCTTCTGTCTCTCAGATTCTCACTGCATTCACTGCCATTGCTTCTGCATCGTCCCTATTCTTCTGTTTCTCTCCTCATGTTGCTTGCATGAAATCGCAATTTGGTTTTTCTGATCCCTTTATATCGAGGTGCTGCTCAAAGTCATTTACAAGAATCCAGGGGTTATTATTGTTGGTATGTTCTGCTCTGGTGGGTGCTTGGCTGGTTTCTGGTCATTGGGTATTGAACAATTTATTAGGAATATCAATTTGCATTGCTTTTGTGAGCCATGTGCGTCTTCCCAATATTAAGATATGTGCAATTCTCCTTGTTTGCCTGTTTGTATATGACATATTCTGGGTTTTCTTCTCTGAGAGATTTTTTGGGGAAAATGTCATGGTATCAGTGGCAACCCAACAAGCATCAAATCCTGTTCACACAGTTGCTAATAGTTTAAGTCTTCCTGGGTTGCAACTTATCGCAAAGAAGCTAGAGTTGCCTGTGAAGATTGTCTTTCCTAGGAATTTGTTTGGTGGTGGTGCTCCTGCAGGGAGTAGAACAGATTTTATGATGCTCGGACTAGGAGATATGGCAATTCCAGCCATGCTGCTGGCTCTAGTCCTCGGCTTTGATTACCGAAAGAGCAGGGAAATAGTGACACTCTTTGATATACATTCCTCAAAGGGGCACAAATACATATGGTATGCACTTCCTGGATATGCCATTGGACTGGTAACTGCTTTGGCAGCTGGTGTACTGACTCACTCTCCTCAACCTGCTCTTCTATATCTAGTACCTTCCACCTTGGGACCTGTAGTTATCATCTCTTGGTTAAGGCAGGAACTAGTAGAGTTGTGGGAAGGACCCTTGCCAACTTACAACGATAAGGCTCACCTAGTTGAAGTTTGA 1116 0.4274 MESLWNLLYLLEAAPVTLVITAVVVTFASAFRALNHGKEMERSRDLSEASITLDSSQALMIPVMSSFSLLLMFYLFSSVSQILTAFTAIASASSLFFCFSPHVACMKSQFGFSDPFISRCCSKSFTRIQGLLLLVCSALVGAWLVSGHWVLNNLLGISICIAFVSHVRLPNIKICAILLVCLFVYDIFWVFFSERFFGENVMVSVATQQASNPVHTVANSLSLPGLQLIAKKLELPVKIVFPRNLFGGGAPAGSRTDFMMLGLGDMAIPAMLLALVLGFDYRKSREIVTLFDIHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVVIISWLRQELVELWEGPLPTYNDKAHLVEV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00279 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016020
Pte16g00279 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 11 361 IPR007369 GO:0004190|GO:0016020
Pte16g00279 371 Pfam Signal peptide peptidase 49 357 IPR007369 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00279 Pte-Chr16 3748581 3751271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00279 K09598 - tcc:18605579 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00279 16 3748581 3751271 Pte16g00279 16 3748581 3751271 RCT