Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00263 ATGGTCAAGCTAACGATAGTCGGAAGGGTGAGTGATGGATTGCCTTTAACAAAGGGACATACATACATGAATGAAGAGAGTAGCTACCTCTCATTTTATAAGGAGCAATCTGAATTCATACTCAAAGAAATCAGCAGAGGAGCCCTTACGTCATCCAAGATGAGCATTCTCATTGACCATCATTGTTTTAACTACTTGGTTGTTCAAAGTGGAATTGCGTTCATTGTTTTATGCGATTCTTCATATCCGAGAAAATTGGTTTTCCTTTATCTGCAAGACTTGCAAAAGGAATTTGAAAAGTTCGACAGGGCACTCGTGGAGAAAATCACAAGACCATACAGCTTTGTCAAATTCGATGGTATAATTGGAAGGGTTAGAAAACAATATATGGATACAAGGACTCAAGCGAACCTGTCGAAGCTTAAGGCTAATTCGAAACTGGACATAAATATCGTCACTGAAGACATGTCTGATATCATAGCAAGAAAACGATATTCAGGTGCTGATCTTCTCGTCTTAATTACTTCACGTTTGGAATCATGA 543 0.3849 MVKLTIVGRVSDGLPLTKGHTYMNEESSYLSFYKEQSEFILKEISRGALTSSKMSILIDHHCFNYLVVQSGIAFIVLCDSSYPRKLVFLYLQDLQKEFEKFDRALVEKITRPYSFVKFDGIIGRVRKQYMDTRTQANLSKLKANSKLDINIVTEDMSDIIARKRYSGADLLVLITSRLES* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00263 180 SUPERFAMILY SNARE-like 1 130 IPR011012 -
Pte16g00263 180 SMART Longin_2 36 121 IPR010908 -
Pte16g00263 180 CDD Longin 5 129 IPR010908 -
Pte16g00263 180 Gene3D Longin domain 1 130 - -
Pte16g00263 180 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 164 IPR044565 GO:0005484|GO:0006888|GO:0006890
Pte16g00263 180 Pfam Regulated-SNARE-like domain 39 119 IPR010908 -
Pte16g00263 180 ProSiteProfiles Longin domain profile. 6 122 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00263 Pte-Chr16 3579826 3580712 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00263 K08517 - tcc:18605553 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00263 16 3579826 3580712 Pte16g00263 16 3579826 3580712 RCT