Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00250 ATGCCCAAACTGTGTATATTCTTTGCTTGTGCAACTAAGGTCTTTCACAAGCTCAATAACAAGAAGATTCAAACTTTCCCATTCATCCTCAGACATTTTATTCCGACTAGAGAAATGTCACAGTCCACTTCCATACCCAAAAACCTTCAAAGGGTCAGGGATCATGGCTATGACGACTACATGGAGATTGAGAAAAAGGTGCGTAAAGTACTCAAATTCCAAGACCTGATTTTGTCCCAGTATAACCAAACAATACCAATATCTCGTCTTGATGTAATGGCTCGCAGACTTGGCTTCAAGCAGTACGAGGCTGGCAAGTTTATTCTTAAATTCCCACATGTTTTTGAAATTTACGAACACCCAGTTCAGAGGATTCTCTATTGTCGGTTGACGCGTCAAGCCAATCTTCAAATTGAGCAAGAAAAACAGGCTATTCTTGCTCAAATTCCAGATGGTGTTACAAGACTCAGGAAGCTTCTGATGATGTCTCGGACAGGAAGGCTTTGTCTCGAGCATGTTCGGGTTGCAAGGGCTGCATTTGGGCTCCCTGATGATTTTGAATACTCGGTGATTCTCAAGTATCCACGGTACTTTAGACTGTATAATGCAAAAGAGACTTGGGAAAAGTACATTGCGCTTGTCGAAAGAGATCCTAAATTAGCTGTATGCGCAATTGAGAAAACTCGAGAGAAGGAGTACAGGGAAAAAGGAATTGCTGCTGAAGATTGTAGATTTTCGTTTCTTATAAATTTTCCACCCGGGTTTAAGATTGGCAAGTATTATAGAATTGCAGTGTGGAAATGGCAAAGGACTCCTTACTGGTCTCCATATGAAGATATATCAGGGTATGATTTAAGGTCTCATGAAGCTCAGAAACGAATGGAAAAGAGGGCGGTAGCTATGATACATGAATTATTGTCGTTGTGTGTGGAGAAGAAAATTACATTGGAAAGGATTGCGCAGTTTCGAGATGTGTTTGACTTGCCCAAAAAGCTGAAGGACTTTCTTCTTCAACATCAAGGGATATTTTACATTTCGACTAGAGGAAATCATGGAAAACTTCACACTGTATTTCTTAGAGAGGCATATAAAAAGGGAAAGTTGATTGAGGCAAATGATGTATATTTGGCGAGAAGGAAGTTGGCTGAGTTGGTTGGACCTGCTAGCTTCAACAGGGCCAAAGGGGAAGATAAGATGAGCCACATGAGAAGACACTATGAAGAGAATGATATTGCAAGAGACAATGTAGATAATAATTATGAAGAATGCAGTAATAGAGATGATGTTGAGAAATATATGGAGGAGGAAGATCTGGAATCAGATGTAGGTAGTGCTTGTGATACAGATTTGACTGATGAGGATGATGCTTATGATGGTGCTGGTAGTGGGAAGGATATCTGTATGACTGATTAG 1413 0.4027 MPKLCIFFACATKVFHKLNNKKIQTFPFILRHFIPTREMSQSTSIPKNLQRVRDHGYDDYMEIEKKVRKVLKFQDLILSQYNQTIPISRLDVMARRLGFKQYEAGKFILKFPHVFEIYEHPVQRILYCRLTRQANLQIEQEKQAILAQIPDGVTRLRKLLMMSRTGRLCLEHVRVARAAFGLPDDFEYSVILKYPRYFRLYNAKETWEKYIALVERDPKLAVCAIEKTREKEYREKGIAAEDCRFSFLINFPPGFKIGKYYRIAVWKWQRTPYWSPYEDISGYDLRSHEAQKRMEKRAVAMIHELLSLCVEKKITLERIAQFRDVFDLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREAYKKGKLIEANDVYLARRKLAELVGPASFNRAKGEDKMSHMRRHYEENDIARDNVDNNYEECSNRDDVEKYMEEEDLESDVGSACDTDLTDEDDAYDGAGSGKDICMTD* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00250 470 MobiDBLite consensus disorder prediction 433 456 - -
Pte16g00250 470 Pfam Plant organelle RNA recognition domain 52 386 IPR021099 GO:0003723
Pte16g00250 470 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 36 417 IPR045040 GO:0003723
Pte16g00250 470 MobiDBLite consensus disorder prediction 433 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00250 Pte-Chr16 3076483 3080618 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00250 - - qsa:O6P43_008249 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00250 16 3076483 3080618 Pte16g00250 16 3076483 3080618 RCT