Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00243 ATGGCATTTGCTACTACAGTCTCTATCGTACCATCTGGCTGTTGCATTTGTCGAACTCAGCAAAGTTGCTACGAAGATCACAAGGCTTGGGGTCTGGGTCTAGCTGGTGAAACATGTAGGGTGGTGAATAGGTTTCCTGTTGGATTAGATGCAAAACGGAATCGCAATGTAGTTGGCGTTAGGTGGAAGTTGAATGCACTTGAGACCCGCATTGTCGAGAATACCAAAGTGAAATCTACCGCTGAAGTCCCAGTAACATGCTACCAGCTTATCGGTGTTTCAGACCGAGCTGAGAAAGATGAAATTGTTAAGGCAGTGATGGATCTAAAAATTGCAGAGATTGAAGAGAGTTACACAATGGATGTTGTTGTATCTCGCCAGGAACTTCTGATGGACATCAGGGATAAGCTTCTATTTGAATCAGAGTATGCTGGTGATGTGAAGGAAAAGATACCACCAAAGTCTTCATTGCGACTACCTTTTTCTTGGTTACCTGCTGCTCTCTGTCTTCTACAGGAGGTTGGAGAGTTGAAGCTTGTTCTGGACATTGGCCAGACGGCCATCCACAATCCAGAATCTAAGCCTTACATACATGATTTACTGCTTTCGCTGGCACTGGCTGAGTGTGCAATTGCCAAGATTGGTTTCGAGAAGAGCAAAGTGTCTCTTGGCTTTGAAGCTCTAGCACGTGCTCAGCGTCTTCTCAGGAGCAAATCGTCATTGGAAAATTTGACATTGTTATCTCAAATCGAGGAATCTCTGGAAGAGCTTGCACCTGCTTGCACCTTGGAACTATTGGGATTGCCACATTTACCTGAAACTGCTGATAGAAGACAAGGAGCAATAGCAGCATTGCGTGAGCTGCTCAGACAGGGTCTTGATGTTGAAACTTCGTGTCAGGTGCAAGACTGGCCATGTTTTCTAAGCCAAGCACTCAACAGATTAATGGCTTCAGAGATTATTGGCCTTCTGCCTTGGGTTAGCTTAGCTAGGACTAGGAAGAACAAGAAATCACTTGAATCACAAAATCAGAGGGTTATAATTGATACTAATTGTTTCCACAAATCTTTGATGGCTCATCTGGCATTTGGATTTTCTAGCAAAGACAAAGACTCGATTACCAGAGCAAAAACAATTGCCGAGTGTTTAATGGCATCAGAGGGAATTAATCTAAAACTCGAGGAAGCTTTGTGCTTATTCCTTCTTGGTCAGGGAACTGAAACTGATGTGGTGGAGAAGCTCAAGCAACTTGAGATAAATTCAAGCACTAAACAAAGATCTATCTCAGGGAAGGCAGTAGTAGATGGCTCTCCTGCTAAGCCATCACTGGAAATGTGGCTGAAGGATGAGTTGCTGGCACTGTTTCCAGATACAAGAGATTGTTCTCCATCTTTGGTAAATTTTTTTAGCGGTGAGAAAAAAACTTTTTGGATCAGAAGTAAAGAACCAAAACATAACTCACCTACTATTTGTCGTAGACCATTGTCATCATCTATTCTAACTGAGCGAACAGAGAATGAGGATCCAAATTCAGGTATGAAGCCATCGCAAAATATAGGGTTTGCTGTCAAGCAGTTGGCGCCAACTGATTTGCAGAGTTCATTGCTATCAGGGAAGAATACCAATTGTAGCAATGATAATGAATCTTCTGTTCAATTGAAAAGAAATCTTGGCAATCATCATCGAACATTTTCGGATCATTGGTTTGCCTATAAACACCTTGTTGGAAGGATAAGTTTTGTTACTGTATCGGGTTGCATTCTTTTGTCTGCAATGAAGTTGTCTGGGATGAATCTAATTGAAAAAGGGACTGGTTTTAAAAAGGCCTCCTGTAAACCCAACGCATACACTACTCCTTGTGCTTCAGATTCTGCAGACATTAATAGACGACCTACTTGCATCAAGAAAAGTAGTATATCTGATAAACTAAAGAAGCTCTTTGCAGTAATCAAGATGCAGTACATGAAGCGTCCTGACACCATAAATCCTAGCAATTTGTGCTCTGCTGCTTCTTTAACATCTTCCATGACCCATGTATACAGGAGGCAGATGCCCATAGAAGAAGCAGAAATACTTGTCAAGCAATGGCAAACTATCAAAGCTGAGGCTCTAGGGTCAAGCCATGAGATTCATAGCCTCTCTGAAGTCCTTGATGAATCAATGCTAGTTCAGTGGCAAGTACTGGCTGATGCTGCTAGAGTTAGATCTTGTCACTGGAGATTTGTTTTGCTCGGCCTGTCAGTGCTTCGAGCTGACATTTTTGTGGATGATGTGGGAGCTGAGATGGCTGAAATTGAAGTACTCTTGGAGGAAGTAGCAGAGCTTGTTGGTGATTCTCAGTCCAAGAACCCCAATTATTACAGGTATTATATTACTAATTATACTAATAATGTAGGAGACGTAATCCAAGTTGCTGAAAGCCTGCCTTTCTCAATTTTAGTTACACCCTCTTTTGTGCTGATATTGTGGTATTTTGAGAACATCCTAGCGCCATTGTTTCTTTTTTTCTACTTCTATACTTGGTTGACTTGA 2532 0.4186 MAFATTVSIVPSGCCICRTQQSCYEDHKAWGLGLAGETCRVVNRFPVGLDAKRNRNVVGVRWKLNALETRIVENTKVKSTAEVPVTCYQLIGVSDRAEKDEIVKAVMDLKIAEIEESYTMDVVVSRQELLMDIRDKLLFESEYAGDVKEKIPPKSSLRLPFSWLPAALCLLQEVGELKLVLDIGQTAIHNPESKPYIHDLLLSLALAECAIAKIGFEKSKVSLGFEALARAQRLLRSKSSLENLTLLSQIEESLEELAPACTLELLGLPHLPETADRRQGAIAALRELLRQGLDVETSCQVQDWPCFLSQALNRLMASEIIGLLPWVSLARTRKNKKSLESQNQRVIIDTNCFHKSLMAHLAFGFSSKDKDSITRAKTIAECLMASEGINLKLEEALCLFLLGQGTETDVVEKLKQLEINSSTKQRSISGKAVVDGSPAKPSLEMWLKDELLALFPDTRDCSPSLVNFFSGEKKTFWIRSKEPKHNSPTICRRPLSSSILTERTENEDPNSGMKPSQNIGFAVKQLAPTDLQSSLLSGKNTNCSNDNESSVQLKRNLGNHHRTFSDHWFAYKHLVGRISFVTVSGCILLSAMKLSGMNLIEKGTGFKKASCKPNAYTTPCASDSADINRRPTCIKKSSISDKLKKLFAVIKMQYMKRPDTINPSNLCSAASLTSSMTHVYRRQMPIEEAEILVKQWQTIKAEALGSSHEIHSLSEVLDESMLVQWQVLADAARVRSCHWRFVLLGLSVLRADIFVDDVGAEMAEIEVLLEEVAELVGDSQSKNPNYYRYYITNYTNNVGDVIQVAESLPFSILVTPSFVLILWYFENILAPLFLFFYFYTWLT* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00243 843 Coils Coil 329 349 - -
Pte16g00243 843 Pfam ARC6-like, IMS domain 689 794 IPR025344 -
Pte16g00243 843 MobiDBLite consensus disorder prediction 491 517 - -
Pte16g00243 843 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 53 796 IPR044685 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00243 Pte-Chr16 2972737 2979197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00243 - - qsa:O6P43_008398 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00243 16 2972737 2979197 Pte16g00243 16 2972737 2979197 RCT