Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00225 ATGGGAGCTACTGTTTCTGCATGCGACAAAGAAACAAGCTGTGCAACTGGTTTGCTTGATCTGCCAGAGAATTGTACAACTTTCATCCTTACCAAATTAGACCCACCTGAAATTTGTAGATTGGCAAAAGTAAACAGGTCTCTATGTGAAGCTTCTTCTGTCGATCTTGTTTGGGAATCAAAGCTGCCATCCAATTACCAGTTTCTTATCAAGAGGGTACTTGGCCAAGACAAGATAATGAACAACCTAAGTAAGAGAGAGATTTATGCCAAACTCTGTCGCTCAAATCGCTTCGATGCTGACACAAAGGAATTCTGGATGGATAAAAGTAATGGGAGTGTTTGTTTGGCCATTTCATCAAAGGGCTTGAAGATTACTGGAATAGAAGATAGAAGATATTGGAGTTTTGTCCCCACGGAGGAATCCAGGTTCCAAAACATTGCATATCTACAGCAAATGTGGTGGGTTGAAATAGAGGGTGAAATAGAGTTTGAATTCCCAAATGGTAGCTATAGCGTTTTCTTGAGGCTTCAGCTTGGGAGACCCTCGAGAAGATTTGGCATTCGGATATGTGATGTTGATCAAGTCCATGGCTGGGACATGAAGCCACTCAAGCTTCAGCTCTCAACATCCAATGGCTACCATGCTTCTTCCAAATGCTTCTTGCACAAAGCTGGAAGATGGACAAATTACCATGTGGGAGACTTTGTGGTTGAAAATACTAACACTAACACTAACACTCCCACAAAGATCAAATTTTCAATGCTACAAAATGACTGTACACACACTAAAGGTGGACTTTGTGTAGACTCAGTGTTAATATACCCCAGTGACCGATAA 840 0.4143 MGATVSACDKETSCATGLLDLPENCTTFILTKLDPPEICRLAKVNRSLCEASSVDLVWESKLPSNYQFLIKRVLGQDKIMNNLSKREIYAKLCRSNRFDADTKEFWMDKSNGSVCLAISSKGLKITGIEDRRYWSFVPTEESRFQNIAYLQQMWWVEIEGEIEFEFPNGSYSVFLRLQLGRPSRRFGIRICDVDQVHGWDMKPLKLQLSTSNGYHASSKCFLHKAGRWTNYHVGDFVVENTNTNTNTPTKIKFSMLQNDCTHTKGGLCVDSVLIYPSDR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00225 279 ProSiteProfiles F-box domain profile. 15 61 IPR001810 GO:0005515
Pte16g00225 279 Pfam Phloem protein 2 114 276 IPR025886 -
Pte16g00225 279 PANTHER F-BOX PROTEIN PP2-A15 8 277 - -
Pte16g00225 279 CDD F-box_AtSKIP3-like 18 63 - -
Pte16g00225 279 SUPERFAMILY F-box domain 10 94 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00225 Pte-Chr16 2830342 2832480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00225 - - tcc:18605507 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00225 16 2830342 2832480 Pte16g00225 16 2830342 2832480 RCT