Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00196 ATGTTGAGAGAAATAGTTCTCCTGCTCCTCTTTACTTGTGGCTTCGCTTATTCATCGTCTGAACAACCTTTTCCTCAACCACAAGTTGCTCCTGAATCTTTTAATATCAGCTATATCCAGAACTTAGGCAGCTGTTCTTACACGGTTGAAATATCAACGAGTTGCTCTTCACCTACGTATACAAGAGATCAGATCAGCATCGCTTTCGGTGATGCCTATGGCAACCAGATTTATGCTCCAAGAATAGATGATCCATCTACAAGAGCGTTTGAAAGGTGTTCTTCAGATACTTTTCACATATACGGGCCATGCGCATACCAGATTTGTTATGTGTACCTCTATCGAACTGGACCAGATGGTTGGATGCCCAAGACAGTGAGAATCTACAGTCATAACTCAAGGGCTGTTACATTTTACTACAACACTTTCATTCCTGGAGATGCTTGGTTTGGCTTTAATTACTGCAACAGTGCTTCTTCGTCTAAACTGTTAAGTGCAAATAGCTTTTTGCTACTTCTAGGTTTTGGATTCAGTCTGCTGTTGTAA 546 0.4103 MLREIVLLLLFTCGFAYSSSEQPFPQPQVAPESFNISYIQNLGSCSYTVEISTSCSSPTYTRDQISIAFGDAYGNQIYAPRIDDPSTRAFERCSSDTFHIYGPCAYQICYVYLYRTGPDGWMPKTVRIYSHNSRAVTFYYNTFIPGDAWFGFNYCNSASSSKLLSANSFLLLLGFGFSLLL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00196 181 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 42 152 IPR036392 GO:0005515
Pte16g00196 181 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 6 158 - -
Pte16g00196 181 CDD PLAT 45 156 - -
Pte16g00196 181 Gene3D PLAT/LH2 domain 43 150 - -
Pte16g00196 181 Pfam Embryo-specific protein 3, (ATS3) 40 155 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00196 Pte-Chr16 2315619 2317410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00196 - - qsa:O6P43_005501 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00196 16 2315619 2317410 Pte16g00196 16 2315619 2317410 RCT