Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00183 ATGTCAAACCTTAAAGTAAAGCAAGTCTTGCCTGTCATACTCGCAGTGGTTGTATCTCTCTATCTCTCTGTCTCATTGGTAACCCGTACACGCACTGAGACCTCCATGACAACAGCCTCAGCAACCACTGTGATCGACATATTTGGAGTGAAGATTGAGAAGAACCCTCCTGAATCCAAACTCACTGACCTTGCTGTCGCAACATGGTCCACGTATGAATGTGGTCCAAGCAAATTTCCATGGACATTCACTGCCACAGAGACTATGTATTTTCTACAAGGAAAAGTGAAAGTTAATGTTGAAGGTTTTGATGGATCATTTGAAATTGGTGCTGGGGATTTGGTTATCTTCCCCGAAGGAATGGAGGTCACTTGGGATGTCATTGAAGCTGTCAAAAAACACTATTCCTTGGAAAAAAAATTAGGCAATTTTATGTAA 438 0.4178 MSNLKVKQVLPVILAVVVSLYLSVSLVTRTRTETSMTTASATTVIDIFGVKIEKNPPESKLTDLAVATWSTYECGPSKFPWTFTATETMYFLQGKVKVNVEGFDGSFEIGAGDLVIFPEGMEVTWDVIEAVKKHYSLEKKLGNFM* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00183 145 SUPERFAMILY RmlC-like cupins 62 135 IPR011051 -
Pte16g00183 145 PANTHER OS04G0445200 PROTEIN 34 138 - -
Pte16g00183 145 Pfam EutQ-like cupin domain 63 135 IPR008579 -
Pte16g00183 145 CDD cupin_TM1112-like 68 137 - -
Pte16g00183 145 Gene3D Jelly Rolls 37 137 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00183 Pte-Chr16 2141312 2143814 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00183 K06995 - qsa:O6P43_005464 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00183 16 2141312 2143814 Pte16g00183 16 2141312 2143814 RCT