Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00181 ATGTCTCGCTTGTTCTTAAGATGGAGGAAGCTCAAGGAAGCAGCTCTGGTTTCTTCAACAACCAAGGCCCAGTTGTTTATTTTGTCTTCAGCAACTGGGTCTCACCCCGCGGTCAGTAGCTTCACTCAGGTGCGCCCAATTTCGACTCATTTGAATCATCTCCACACAGCGAACTATAGGCGCAGGGAATCGCTAACTGGAGTTCAGGAAAGGTATAAATGGGACCGTGGCGGTTCTGATGATTTCAATAACCATGGCAGTCGAACTAGGAAGATAAGGGCAGAGGCTAATTGCCCACGTTGCTCGAGGCATATGGACTTGCTGTTTTCCAATAAGCATTTTCCCGGTACAAGAGGAGATGAGTATGCGCATAAAAGTAGCAGAAGCAGTAAGTTTGGGGTGTCATTCTGGGAAACATTACGATCATATGGCAGTGGCAGTGGTGGTGGTAATGGAGGAGACTCGCCAGAGAATTGGTCTCCTCCACCACCAGGTGGAAATGGGTTGGCCGTGCATATTCCGCCAGGGCCCCCGTTCACTCCAGGGTTAAATGTCATTCGGGCTTCAGGGCCAGGTGGAGGTGGAGGCAATGGAGAGAAAAATGGATGGGGAGTCTCCAATTTGGGTAAGGATTTGCCAACGCCAAAGGAAATCTGCTTGGGTCTCGACAAGTTTGTCATTGGCCAGGAAAGAGCTAAGAAGGTGCTTGCCGTGGCTGTTTACAACCATTATAAAAGAGTATGGTATACCTCCTCACAAAGAGGGTCGGAAGCAGAAGCGGTAGATGATGACGATAATGTGGAGCTAGACAAGAGCAATGTTCTCTTGATGGGTCCAACAGGGTCAGGGAAGACATTGCTTGCAAAGACATTGGCTCGTTTGGTGAATGTTCCCTTTGTCATTGCAGATGCGACAACCTTAACACAGGCTGGTTACGTTGGAGAAGATGTAGAGTCAATATTGTATAAACTGCTTGCGGTAGCAGAATTCAATGTTCAAGCTGCTCAACAAGGAATTGTCTACATTGACGAAGTTGACAAAATAACTAAAAAGGCTGAGAGCTTAAACATAAGTAGAGATGTTTCTGGTGAGGGTGTCCAGCAGGCATTACTGAAAATGCTCGAAGGAACTATAGTCAGTGTCCCTGAGAAAGGAGCAAGAAAGCATCCTCGAGGGGATAACATACAGATAGATACAAGGGATATCCTATTCATTTGTGGTGGGGCATTTATTGACCTTGAGAAAACCATTTCAGAGAGACGACAAGATTCATCAATTGGATTTGGAGCACCAGTTCGTGCCAACATGAGAGCTGGTGGAGTAATCAATGCTGCAGTCACTTCATCTTTGCTTGAATCCGTTGAAAGTTCAGATCTTATTGCGTACGGACTTATACCGGAGTTTATAGGACGATTTCCAATCCTAGTTAGTTTGGCTGCATTAACAGAGGAACAGCTTGTTCAGGTGCTCTCTGAACCTAGAAATGCTCTTGGTAAGCAGTACAAGAAATTATTCAGCATGAACGATGTGAAACTGCATTTCACAGACAAAGCTCTCAGGCTGATTGCCAAAAAGGCAATGGCAAAAAATACTGGTGCAAGGGGTTTAAGAGCCATACTGGAAAGCATCCTAACTGAAGCCATGTATGAGATTCCAGATGTGAAGACAGGAAATGAAAGAGTTGATGCTGTCATAGTAGATGAGGAGTCCGTGGGAACAGTAAATTCCATTGGATGTGGGGGGAAAATTCTCTGTGGAGACGGTGCACTGGATCGCTACCTTGCCAAGGCGAAAGATGAAAATATTGATGTGGCCGCGGTAGAGTTCCAAGAAGAAGCAGAGCTTTCAACTAGAGCCATGAGCATGTAA 1869 0.4585 MSRLFLRWRKLKEAALVSSTTKAQLFILSSATGSHPAVSSFTQVRPISTHLNHLHTANYRRRESLTGVQERYKWDRGGSDDFNNHGSRTRKIRAEANCPRCSRHMDLLFSNKHFPGTRGDEYAHKSSRSSKFGVSFWETLRSYGSGSGGGNGGDSPENWSPPPPGGNGLAVHIPPGPPFTPGLNVIRASGPGGGGGNGEKNGWGVSNLGKDLPTPKEICLGLDKFVIGQERAKKVLAVAVYNHYKRVWYTSSQRGSEAEAVDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLAVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVSVPEKGARKHPRGDNIQIDTRDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGVINAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLAALTEEQLVQVLSEPRNALGKQYKKLFSMNDVKLHFTDKALRLIAKKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVIVDEESVGTVNSIGCGGKILCGDGALDRYLAKAKDENIDVAAVEFQEEAELSTRAMSM* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00181 622 Pfam C-terminal, D2-small domain, of ClpB protein 481 551 IPR019489 -
Pte16g00181 622 Pfam AAA domain (Cdc48 subfamily) 271 474 IPR003959 GO:0005524|GO:0016887
Pte16g00181 622 Gene3D - 480 578 - -
Pte16g00181 622 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 94 599 - -
Pte16g00181 622 SMART AAA_5 270 432 IPR003593 GO:0016887
Pte16g00181 622 CDD RecA-like_ClpX 213 478 - -
Pte16g00181 622 MobiDBLite consensus disorder prediction 145 208 - -
Pte16g00181 622 FunFam ATP-dependent Clp protease ATP-binding subunit ClpX 480 582 - -
Pte16g00181 622 FunFam CLP protease regulatory subunit CLPX3 mitochondrial 206 479 - -
Pte16g00181 622 MobiDBLite consensus disorder prediction 157 181 - -
Pte16g00181 622 Gene3D - 206 479 IPR027417 -
Pte16g00181 622 NCBIfam ATP-dependent protease ATP-binding subunit ClpX 209 571 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Pte16g00181 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 566 IPR027417 -
Pte16g00181 622 SMART ClpB_D2_small_2 481 574 IPR019489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00181 Pte-Chr16 2131768 2138096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00181 K03544 - nnu:104593914 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00181 16 2131768 2138096 Pte16g00181 16 2131768 2138096 RCT