Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00126 ATGGCTGATCCGAGTTTGACACCAGAGCTTTTTGAACTTAACAACGGGACCATGAAGGTTGTGATAACCAACCTGGGCTGTACTATCACTTCCTTGTCTGTACCTGCCAAGGATGGGAAATTGGAAGATGTTGTTCTTGGATTTGACTCGGTTGAACCATATCAGAAAGGTCTTGCTCCTTATTTTGGTTGCATTGTTGGTCGCGTTGCGAACAGGATCAAAGAAGGGAAGTTTGAACTTGATGGGGTTCAGTACTCTTTACCACTCAACCAGCCCCCGAACAGTCTACATGGTGGGCATAAAGGTTTTGACAAAAGGGTCTGGGAGGTTGATGAACACAAGAAAGGCGACAATCCATCCATCACTTTTAAATACCATAGTCACGATGGAGAGGAAGGTTACCCTGGAAATGTTGTTGTCACTGCAACTTACACATTGACTGCAAGCACAACATTGAGGCTTGACATGGTGGCAGTACCTGAGAACAAGCCTACTCCAATTAGCTTAGCTCAGCATACCTACTGGAACCTAGCAGGCCACAACTCAGGAAACATACTCGACCATACAGTTCAGATATGGGCACACCATATTACTCCTCTGGATGAAAACACTGTTCCAACTGGTGAGATCAAACCCATAAAAGGCACACCATTTGATTTTACCACTGAGAAAAGAGTAGGGGAGTCCATCCATGAGGTTGGATTAGGTTATGATCACAACTATGTGCTTGATGGTGAGGATGAAAAATCAGGACTGAAGCATGCTGCAAAAGTGAGAGATCCTTTAAGTGGCAGGGTGTTGAATCTATGGACTGATGCTCCTGGTATGCAGTTTTACACAGGAAACTATGTCAATGGCGTTGTTGGCAAGGGAGGAGCTGTCTATGGTAAATATGCAGGGTTATGTCTGGAGACTCAGGGATTCCCCAATGCCATAAACCAGCCAAACTTCCCATCTGTTGTGGTTCGTCCTGGCGAGAAGTACCAGCATTCTATGTTGTTTGAATTTTCAGTCGAATAA 1020 0.448 MADPSLTPELFELNNGTMKVVITNLGCTITSLSVPAKDGKLEDVVLGFDSVEPYQKGLAPYFGCIVGRVANRIKEGKFELDGVQYSLPLNQPPNSLHGGHKGFDKRVWEVDEHKKGDNPSITFKYHSHDGEEGYPGNVVVTATYTLTASTTLRLDMVAVPENKPTPISLAQHTYWNLAGHNSGNILDHTVQIWAHHITPLDENTVPTGEIKPIKGTPFDFTTEKRVGESIHEVGLGYDHNYVLDGEDEKSGLKHAAKVRDPLSGRVLNLWTDAPGMQFYTGNYVNGVVGKGGAVYGKYAGLCLETQGFPNAINQPNFPSVVVRPGEKYQHSMLFEFSVE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00126 339 CDD galactose_mutarotase_like 10 336 IPR047215 GO:0016853
Pte16g00126 339 Gene3D - 5 339 IPR014718 GO:0030246
Pte16g00126 339 FunFam Aldose 1-epimerase 2 338 - -
Pte16g00126 339 SUPERFAMILY Galactose mutarotase-like 9 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pte16g00126 339 PANTHER ALDOSE-1-EPIMERASE 9 338 - -
Pte16g00126 339 PIRSF GALM 5 339 IPR015443 GO:0016853|GO:0019318
Pte16g00126 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00126 Pte-Chr16 1415179 1417610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00126 11 340 Miscellaneous Gene Families AT3G47800 53.030 3.34e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00126 K01785 - jre:108980349 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00126 16 1415179 1417610 Pte16g00126 16 1415179 1417610 RCT