Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00116 ATGGCTGGAGGGTTTGATGAAGACTGTGATTACCTGTTCAAGGCTGTTCTTATAGGAGATTCTGGGGTTGGAAAATCTAATCTTCTCTCAAGGTTTGCAAAGGACGAATTTTGCTTGGATTCCAAGGCAACCATAGGTGTTGAATTTGCATACAGGAATGTTAAGGTAGGAGATAAACTCATCAAGGCCCAGGTATGGGATACTGCAGGTCAAGAAAGGTTCAGAGCAATAACAAGTTCATATTACCGTGGAGCTTTAGGAGCATTGCTGATTTACGACATCTCAAGTCGAGGGACTTACAGAAATGTGCCAAAATGGTTAAAGGAGCTTAGAGAATCGGGTAATGAAGACATGGTAGTTGTTTTGATTGGGAATAAAAGTGATCTAGGCCGTCATTCAAGGGAAGTGAGTGAGGAAGAAGGAAAAAGTTTTGCAGAAAAAGAAAAGATATGCTTCATGGAAACCTCTGCAATGCAGAATTTAAATGTTGAGGAAGCTTTCTTACAGATGATTCATAAAATCCATGATATTACAAACCAGAAAATCTTGCAGACCAAGCTCAATAGGACAACATCAAATCTTCTAAATGGGGAAGAGATAGTTCTAATTGATGAAGTAACTGCGACTAAACAATCAAATTGCTGTACTAGGGTGTAG 657 0.3927 MAGGFDEDCDYLFKAVLIGDSGVGKSNLLSRFAKDEFCLDSKATIGVEFAYRNVKVGDKLIKAQVWDTAGQERFRAITSSYYRGALGALLIYDISSRGTYRNVPKWLKELRESGNEDMVVVLIGNKSDLGRHSREVSEEEGKSFAEKEKICFMETSAMQNLNVEEAFLQMIHKIHDITNQKILQTKLNRTTSNLLNGEEIVLIDEVTATKQSNCCTRV* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00116 218 PANTHER DRAB11-RELATED 7 190 - -
Pte16g00116 218 SMART ran_sub_2 18 209 - -
Pte16g00116 218 SMART ras_sub_4 10 177 - -
Pte16g00116 218 CDD Rab11_like 10 175 - -
Pte16g00116 218 FunFam ras-related protein RABA5a 5 215 - -
Pte16g00116 218 PRINTS Transforming protein P21 ras signature 152 174 - -
Pte16g00116 218 PRINTS Transforming protein P21 ras signature 36 52 - -
Pte16g00116 218 PRINTS Transforming protein P21 ras signature 54 76 - -
Pte16g00116 218 PRINTS Transforming protein P21 ras signature 13 34 - -
Pte16g00116 218 PRINTS Transforming protein P21 ras signature 116 129 - -
Pte16g00116 218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 182 IPR027417 -
Pte16g00116 218 Gene3D - 6 215 IPR027417 -
Pte16g00116 218 NCBIfam small GTP-binding protein domain 12 167 IPR005225 GO:0005525
Pte16g00116 218 ProSiteProfiles small GTPase Rho family profile. 6 175 - -
Pte16g00116 218 ProSiteProfiles small GTPase Ras family profile. 7 202 IPR001806 GO:0003924|GO:0005525
Pte16g00116 218 ProSiteProfiles small GTPase Rab1 family profile. 8 215 - -
Pte16g00116 218 Pfam Ras family 14 175 IPR001806 GO:0003924|GO:0005525
Pte16g00116 218 SMART rab_sub_5 13 177 - -
Pte16g00116 218 SMART rho_sub_3 15 177 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00116 Pte-Chr16 1286404 1287947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00116 K07976 - gmx:100784107 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00116 16 1286404 1287947 Pte16g00116 16 1286404 1287947 RCT