Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00088 ATGTCGCTCCAAGGCAGCTCCGGTGGACTCAGGGATGGTGTTGAGTCGGAATCTCCACCAAAGGGAACCACCGTTAGTGGTGGTGGTGGAAATGGTTTTGTTTCTGATGAAAATACCAACTTCAACAACGACGACAACAACAACAATCACCTTCAGCAGCCGGCGACTACCCCTGTAGTTCAGGACTTCAAGTTGTCGCCCTATCCCAATGAGGAACATGTGTCTGAGAGTTACGAAGATTTGCCGCTTGAGTACTCCCCCTCGCTTTACAGCGCGCTTGAGAAGTACTTGCCCGCCTACATGCTAAATTGTGACAGGGAAGCTAAGATTGAGTACATGAGGCCCATTTTGCGCAAGTATTATTCGGCAGAAGAGCTGACCAGAGTTCGGAAACATATGGACTACAGGCACAAGATATTATCAAATTACCAGCCTTTACACAGAGAGTTGTATACCTTGAACCCTTTGGCCTTCTTTGCTCCCTCATTCCTCCGAGCAATCAATGACAATACAGAGAAAAGCTTGAGAAGTATCATGTCCGAACCTTCCCCAGGCGTTTTTACGTTTGAAATGTTTCAGCCCTATTTCTGCGAATTACTGATGTCCGAGGTAGAAAATTTTCAGCGGTGGGTCGACGATGCAAAATTCCAAAAAATGCGACCAAACACAATGAATAAACATGGTGCTGTTCTGGATGACTTTGGCCTTGAGATCATGCTTAACAAGCTTATGGATGGTTATGTCCAACCTATTTGTAAAGTGTTCTTTGAAGAGTTTGAAGGATTGATGCTCGATTCTCATCACGGGTTTGTTGTTGAGTATGGTAGAGATAAAGATCTTGACTTGGGTTTCCATGTGGATGACTCAGAATTGACCTTAAATGTGTGTTTGGGCAAACAATTTTCTGGAGGGGAGTTGTTTTTCCGGGGAACGCGATGTGAGAAACATGTAAACACTGGTAGTCAATCAGAGGAGACCTTTGATTATTCCCATGTTCCAGGGCGAGCTATTCTTCACCGTGGTCGCCATCGCCATGGTGCTAGAGCAACTACTTCTGGTCATCGAATGAACCTGCTTTTGTGGTGCAGAAGTTCTGCGTACAGAGAGATGAAAAAATATCTAGATGATTTCTCTAGCTGGTGTGGAGAGTGCTCTCTCCAGAAGAAGGAAAGGCAGCGTGCCTCAATTAATGCTGCTAAGCTGGCTCTGTTCGGGAGAGCATTTTGA 1227 0.454 MSLQGSSGGLRDGVESESPPKGTTVSGGGGNGFVSDENTNFNNDDNNNNHLQQPATTPVVQDFKLSPYPNEEHVSESYEDLPLEYSPSLYSALEKYLPAYMLNCDREAKIEYMRPILRKYYSAEELTRVRKHMDYRHKILSNYQPLHRELYTLNPLAFFAPSFLRAINDNTEKSLRSIMSEPSPGVFTFEMFQPYFCELLMSEVENFQRWVDDAKFQKMRPNTMNKHGAVLDDFGLEIMLNKLMDGYVQPICKVFFEEFEGLMLDSHHGFVVEYGRDKDLDLGFHVDDSELTLNVCLGKQFSGGELFFRGTRCEKHVNTGSQSEETFDYSHVPGRAILHRGRHRHGARATTSGHRMNLLLWCRSSAYREMKKYLDDFSSWCGECSLQKKERQRASINAAKLALFGRAF* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00088 408 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 265 364 IPR005123 -
Pte16g00088 408 SMART p4hc 184 363 IPR006620 GO:0005506|GO:0016705|GO:0031418
Pte16g00088 408 MobiDBLite consensus disorder prediction 19 54 - -
Pte16g00088 408 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 39 400 - -
Pte16g00088 408 Gene3D q2cbj1_9rhob like domain 186 364 - -
Pte16g00088 408 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00088 Pte-Chr16 1038473 1043939 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00088 - - vvi:100262884 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00088 16 1038473 1043939 Pte16g00088 16 1038473 1043939 RCT