Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00079 ATGGGTAAAAAAAGGAAAAGGTCCGGTTTGAATATGGAAGACTTTGTGAAAATTTTAAACTTTCTTGCAGTGGAGAAGCCGCAAGTTTCAATTTTGATCTCTGTAATACTCTCTGCTTGGTTTATTGAGAGATGGTTGTTCTCTTTCTCCAACTGGGTACCTCTTGTGGTTGCTGTCTGGGCAACTATGCTGTATGGAAGTTACCAACGCAAAATAGTTGTTGAAGATCTGAATAACAAATGGAAGCGAATCATTCTTAATACCTCGCCAGAGACACCATTGGAGCATTGTGAGTGGCTGAATAAACTTTTGACTGAAGTATGGAGTAGTTACTTTAACATAAAGCTTTCAATGAGATTCTCATCTATCGTTGAGGTTAGAATTTTCCTGCTTTTCTTTACATGTGGGCTTTTATCCTTGCTACAGGAAAAACTTGAACTGCAGGAATTTTCACTTGGATCATGTCCACCAAGTTTGGCTCTTCAGGGGGCACGATGGTTCACTGCTGGCAACCAGCGGCTTATGAAATTGGGATTTGACTGGGATACAAATGGATTAAGTATTTTAATGCTAGCGAAGCTGGCCAAGCCATTCATGGGAACTGCTCGGATAGTCATAAATAGCCTTCACATTAAGGGTGATCTTCTATTGATACCCATTCTGGAAGGGAAAGCATTGTTGTACTCATTTCTATCAACACCTGAGGTGCGGATAGGAGTCGCATTTGGAAGTGGTGGAAGCCAATCGCTCCCTGCCACTGAGCTGCCTGGTGTTTCTACTTGGCTGGTTAAATTATTTACTGATATCTTAGTTAGGACAATGGTAGAACCTCGCCGCCGTTGCTACTCTTTGCCAGTTCAGGATTTAAGAAAGAAAGCTGTCGGTGGCATTGTATACGTGACTGTGGTCTCCGCAAGTAAACTTTCTAGAAGTTTCTTGAAGGGAAGTCCCTCCATATGGTGCCAAGAGTTCCCTGTTAATGGCAATTTACGAGAGAATTTTGATGATAAGAATCTGCAGACATTTGTGGAGGTGGAACTTGAGGAGCTAACCAGGAAAACAAAAGTGAAACCTAGTTCAAATCCCCAATGGGATGCAACTTTTAATATGGTTTTGCATGATGACACTGGAATTTTTTGTTTCAATATTTATGAGTGTACTCCAAGCAGTGTGAAGTACAACTATCTTGCAAGTTGTGAGATTAAGATGAAGTATGTGGGAGATGATTCCACCGTGTTTTGGGCAATAGGAACTGACTCTAGTGTAATAGCAAAGCACGCAGGTTTCTGTGGTGAAGAAGTTGAAATGGTCGTTCCATTTGAGGAGGTTACTACAGGGGAGCTGACAGTAAAGCTTGTAGTGAAGGAATGGCAGTTTTCAGATGGTTCACAAAGCTTGATCAGCTCACGGACTATTACACAACCATCAGTTTATAGTTCTTCTAGTCATCTCTTGAGAACAGGAAGAAAAATTTTCATAACTGTCATGGAAGGGAAAGATCTTATGGGAAAAGACAAATCCGGAAAATGCGACCCCTATGTGAAAATTCAATATGGCAAGTCTGTCCAGAAAACAAAAACTGCTCATGCAAATAATCCTGTCTGGAATGAGAAGTTTGAATTTGAGGAGATTGGTGGTGACGAGTACCTTAATATAAAATGCTACATTGAAGAAATTTTTGGAGAAGATAACATCGGAAGTGCTCGTGTAAATTTGGAAGGACTTGCTGAGGGATCAGCTAGAGATGTATGGATTCCCCTTGAAAAAGTAAATTCTGGGGAATTGAGACTTAAGATAGAAGCTGAAGGGCAAAAGGCTTCAGGTGATGATTCTAGCAATGGATGGATTGAACTTGTTCTCATTGAAGCCAAAGATCTTGTGGCTGCTGATCTAAGAGGGACAAGTGATCCTTTCGTAGTTGTTCAATATGGGAATTTGAAGAAAAGAACAAAGGTCATGTACAAGACTCTCAGTCCTCAATGGCACCAGACGTTAGAATTTCCTGATGATGGCAATCCTCTGATTCTGCATGTTAAAGACCATAATTCTTTGTTGCCCACGTCAAGAATTGGTGATTGTGTTGTAGAATATGATAGGTTGCCTCCAAACCAGATGTCTGACAAGTGGATTCCTCTCCAAGGAGTCAAAAGGGGAGAAATCCACATCCAGATTACAAGGAAAGTCCCAGAGCTAGAGAAAAGACCCAGTCTAGATTCTGAGACATCTTTAAGTAGATCACGTCAAATTTCAAGTCGGATGAAACAACTGTTGATCAAGTTGTCGTCTTTAGTGGAGGATGAAGATCTTGAAGAACTCTCTACGGCTTTGAGTGAGCTGGAAAGTCTTGAGGATATGCAGGAAGACTATATAGTCCAACTTGAAACTGAGCAAACACTTATGCTTAACAAAGTAAAAGAACTTGGTCAGGAGATCATGAACGCATCTTCTAGAAGATCCTCTCCAAACTGA 2469 0.4087 MGKKRKRSGLNMEDFVKILNFLAVEKPQVSILISVILSAWFIERWLFSFSNWVPLVVAVWATMLYGSYQRKIVVEDLNNKWKRIILNTSPETPLEHCEWLNKLLTEVWSSYFNIKLSMRFSSIVEVRIFLLFFTCGLLSLLQEKLELQEFSLGSCPPSLALQGARWFTAGNQRLMKLGFDWDTNGLSILMLAKLAKPFMGTARIVINSLHIKGDLLLIPILEGKALLYSFLSTPEVRIGVAFGSGGSQSLPATELPGVSTWLVKLFTDILVRTMVEPRRRCYSLPVQDLRKKAVGGIVYVTVVSASKLSRSFLKGSPSIWCQEFPVNGNLRENFDDKNLQTFVEVELEELTRKTKVKPSSNPQWDATFNMVLHDDTGIFCFNIYECTPSSVKYNYLASCEIKMKYVGDDSTVFWAIGTDSSVIAKHAGFCGEEVEMVVPFEEVTTGELTVKLVVKEWQFSDGSQSLISSRTITQPSVYSSSSHLLRTGRKIFITVMEGKDLMGKDKSGKCDPYVKIQYGKSVQKTKTAHANNPVWNEKFEFEEIGGDEYLNIKCYIEEIFGEDNIGSARVNLEGLAEGSARDVWIPLEKVNSGELRLKIEAEGQKASGDDSSNGWIELVLIEAKDLVAADLRGTSDPFVVVQYGNLKKRTKVMYKTLSPQWHQTLEFPDDGNPLILHVKDHNSLLPTSRIGDCVVEYDRLPPNQMSDKWIPLQGVKRGEIHIQITRKVPELEKRPSLDSETSLSRSRQISSRMKQLLIKLSSLVEDEDLEELSTALSELESLEDMQEDYIVQLETEQTLMLNKVKELGQEIMNASSRRSSPN* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00079 822 ProSiteProfiles C2 domain profile. 591 710 IPR000008 -
Pte16g00079 822 SMART C2_3c 615 709 IPR000008 -
Pte16g00079 822 SMART C2_3c 490 584 IPR000008 -
Pte16g00079 822 SMART C2_3c 297 415 IPR000008 -
Pte16g00079 822 Gene3D C2 domain 604 727 IPR035892 -
Pte16g00079 822 Gene3D C2 domain 475 602 IPR035892 -
Pte16g00079 822 CDD C2 491 587 - -
Pte16g00079 822 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 93 285 IPR031468 GO:0008289
Pte16g00079 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 610 725 IPR035892 -
Pte16g00079 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 291 407 IPR035892 -
Pte16g00079 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 491 601 IPR035892 -
Pte16g00079 822 Gene3D C2 domain 286 415 IPR035892 -
Pte16g00079 822 CDD SMP_SF 143 282 - -
Pte16g00079 822 CDD C2 298 410 - -
Pte16g00079 822 Pfam C2 domain 616 712 IPR000008 -
Pte16g00079 822 Pfam C2 domain 491 587 IPR000008 -
Pte16g00079 822 Pfam C2 domain 297 404 IPR000008 -
Pte16g00079 822 CDD C2 616 712 - -
Pte16g00079 822 ProSiteProfiles C2 domain profile. 468 585 IPR000008 -
Pte16g00079 822 PANTHER OS01G0128800 PROTEIN 5 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00079 Pte-Chr16 890657 897640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00079 453 710 Lipid Metabolism Gene Families AT3G61720 25.084 3.97e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00079 - - qsa:O6P43_008570 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00079 16 890657 897640 Pte16g00079 16 890657 897640 RCT