Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00070 ATGGCTTCTCTGCACTTTGTATCGTCTGTTTCAGTGCTATTTCTGCTCATTCTCATTTTCACCCCAGTCGCCATCTTTTCACAAGACCCCACTAGCTCTTCATCCAGTCCAACCATAGCTGAATGCATGTCTTACCTGCTTCCACTTGCTCCATGCGGACCATTTGTGCAAGGCACTGTGCAGTCTCCAGCACAGCCTTGCTGTGATAACTTCAAGCAAATCTACACCCAGCAGCCACGATGCCTTTGCCTTTTGCTACACAACAACACCTTGAGCTCATTCTCTCTCAATACCACACTTGCTATGAGGCTCCCAGCTCTATGCAGCATACAAGAAGCTAATATCTCCACTTGTCCAGGTTTGGATAACACGGTTCTTGGCTCTCCTCCTCCTCCTCCTCCAACTTCTCGAGTTTCTCATGCTCCAAAAAACAACTCTACTGTACCTGCTTCCCCAGTGGCTCAAGTGGCACCAAGACCAAGCCTCATGGGACTAGGATTCCGTCGAAGCAACGATATCAGATTGAAGGTACCACGTGGTCTCGCCTTGCTGATGGCTGTAACAATTCCTCTAATCACAGCAGCTCTATTCTGA 594 0.4848 MASLHFVSSVSVLFLLILIFTPVAIFSQDPTSSSSSPTIAECMSYLLPLAPCGPFVQGTVQSPAQPCCDNFKQIYTQQPRCLCLLLHNNTLSSFSLNTTLAMRLPALCSIQEANISTCPGLDNTVLGSPPPPPPTSRVSHAPKNNSTVPASPVAQVAPRPSLMGLGFRRSNDIRLKVPRGLALLMAVTIPLITAALF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00070 197 CDD AAI_LTSS 49 110 - -
Pte16g00070 197 Gene3D - 38 115 IPR036312 -
Pte16g00070 197 MobiDBLite consensus disorder prediction 125 152 - -
Pte16g00070 197 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 21 149 IPR043325 -
Pte16g00070 197 Pfam Probable lipid transfer 32 118 IPR016140 -
Pte16g00070 197 SMART aai_6 42 118 IPR016140 -
Pte16g00070 197 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 41 118 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00070 Pte-Chr16 796466 799247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00070 40 167 Acyl Lipid Metabolism Gene Families AT1G73890 55.797 6.69e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00070 - - jre:109013635 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00070 16 796466 799247 Pte16g00070 16 796466 799247 RCT