Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01953 ATGCCTGAAGCTCCAAAAGACTTGGTGAAACCCAGAATTGAGTATAACGTGGCAGAGGAGAACAAGAAAAAGATGCAGTTTATTGAGGATGTCACGGCTAACGCTGACCAAGTCCAGAAACGGGTCCTAGCTGAGATCCTATCACGTAATGCAAACGTGGAGTACTTGCAGAGGCATGGTTTTAATGGCCAAACGGATCGAGAAACCTTCAAGAAACTCCTGCCTGTTATATCCTATGAGGATGTCCAGTCTGACATTAACCGTATTGCCAATGGGGATACTTCTCCGATCCTTTGCTCCGAGCCTATTTCTGAGTTCTTAACTAGCTCTGGTACATCAGGTGGGGAGAGAAAGTTGATGCCCACAATTGAAGAAGAGCTTGAAAGAAAGGCTTTACTTTATAGCCTATTGATGCCTGTAATGAGCCAGTTCATCCCAAACTTAGACAAAGGAAAAGGCATGTACTTGTTGTTCATAAAATCTGAGGCCAAAACCCCAGGTGGACTAGTGGCTCGCCCAGTTCTCACTAGCTATTACAAAAGCGATTACTTCAGACACAGACCTTATGACCCTTATACAAACTACACTAGCCCCAATGAGACCATTCTCTGTCCTGACTCCTACCAAAGCATGTACTCTCAACTCTTGTGTGGTCTCTGCCAACATGATCAAGTCCTAAGAGTGGGTGCTGTCTTTGCCTCTGGTTTCATTCGGGCAATTAGGTTCCTTGAAAAACACTGGCCCCTACTCTGCAAAGATATCAGAACAGGCACCCTTAACTCCCAAATCTGTGATCCTTGTGTCAGAGAAGCTGTCATGAAAATCCTCAAACCTGATCCAAGCCTTGCTGATTTCATTAAGACTGAGTGTAGCAAAAGCTCATGGCAAGGGATTATCACTAGGTTGTGGCCCAACACTAAATATATTGATGTTATTGTCACCGGAGCAATGTCACAGTATATTCCCACATTGGATTACTATGGTGATAGTCTTCCACTTATCTGCACTATGTATGCTTCTAGTGAGTGCTACTTTGGTGTTAACCTTAACCCTCTGGCCAAACCGAATGAGGTTTCATACACCCTCATCCCCAACATGTGTTACTATGAATTCCTACCAGTTAATAGGAGCAATGGTGTAACTGAATCTCATCCTGTCACCATGTCCCTCAACGAGAAAGAACAGGAAGAATTGATTGACCTTGTTGATGTCAAACTTGGCCAAGAGTATGAGCTTGTTGTCACAACATATTCGGGGCTTTTTCGGTATAGAGTCGGAGATGTTCTTCGAGTGGCTGGATTCAAGAACAAGGCACCACAATTCAACTTTGTATGCAGGAAGAATGTGGTTTTAAGCATTGATTCAGACAAGACGGATGAAGTTGAGCTCCAGAACGCAATGAAGAATGCAGTGAATCATCTTATACCATTTGATGCTACTGTGGCCGAGTACACTAGCTACGCCGACACTTCCACCATCCCCGGCCACTATGTGCTATATTGGGAGCTCAACCTCAATGGATCAACTCCAATTCCACCCTCAGTGTTTGAGGACTGTTGCTTAACCATGGAAGAGTCACTGAACAGTGTATACCGGCAAGGTCGCGTGTCGGACAAGTCAATTGGGCCTCTTGAGATCAAGATTGTTGAGTCTGGTACATTCGACAAGCTCATGGACTATGCCATTAGCTTAGGGGCATCAATAAACCAGTACAAGACTCCTAGATGTGTCAAATTTGCACCCATAGTTGAACTTCTGAACTCAAGGGTAGTGTCAAACTATTTCAGTCCTAAATGCCCCAAATGGGTTCCAGGTCACAAGCTATGGAGCAACCAAAATTGA 1842 0.4435 MPEAPKDLVKPRIEYNVAEENKKKMQFIEDVTANADQVQKRVLAEILSRNANVEYLQRHGFNGQTDRETFKKLLPVISYEDVQSDINRIANGDTSPILCSEPISEFLTSSGTSGGERKLMPTIEEELERKALLYSLLMPVMSQFIPNLDKGKGMYLLFIKSEAKTPGGLVARPVLTSYYKSDYFRHRPYDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQHDQVLRVGAVFASGFIRAIRFLEKHWPLLCKDIRTGTLNSQICDPCVREAVMKILKPDPSLADFIKTECSKSSWQGIITRLWPNTKYIDVIVTGAMSQYIPTLDYYGDSLPLICTMYASSECYFGVNLNPLAKPNEVSYTLIPNMCYYEFLPVNRSNGVTESHPVTMSLNEKEQEELIDLVDVKLGQEYELVVTTYSGLFRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMKNAVNHLIPFDATVAEYTSYADTSTIPGHYVLYWELNLNGSTPIPPSVFEDCCLTMEESLNSVYRQGRVSDKSIGPLEIKIVESGTFDKLMDYAISLGASINQYKTPRCVKFAPIVELLNSRVVSNYFSPKCPKWVPGHKLWSNQN* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01953 613 Pfam GH3 auxin-responsive promoter 28 578 IPR004993 -
Pte15g01953 613 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 21 599 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01953 Pte-Chr15 25773539 25775854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01953 16 596 EF-hand Containing Proteins AT1G23160 49.492 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01953 K14487 - qsa:O6P43_000891 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01953 15 25773539 25775854 Pte15g01953 15 25773539 25775854 RCT