LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte15g01946	ATGAACGAAAAACTGAGAGAAATTGAGAAACTGAAAGAGGAGATGAAAAGGATGCTAGCTGATCCAAAGAAAATTCAATCAGAAAAACTGGAACTTATTGATTCAATTCAACGCTTAGGTGTGTCCTATCATTTTGAGAAGGAGATAGAGAATATTCTGGAACAGATTTACCAGTCAACAAAAGACAAATGCGTAGAGAAGGAAATTCATGATGACCTCCATAGTCTTTCCCTTTGGTTCCGGTTGCTTAGACAACAAGGTTACTCCATTTCAAGTGGCGTGTTCAACAAGTTTGAATTGGAAGAAATAGGGTTGAAGAATTCTGATGCATACAGCGTAAAAGGAATTCTAAGTTTATATGAGGCTACGCATCTGAGGAAGCATGGAGAGCACATGTTAGATCAAGCTCATGATCGTGTTGCGGCTTACCTTGAGGCTCTTGTGCCTTCATTAAACCCCACTCTTAAAGCTCAAGTAAGTCATGCATTGAAGCAAGCCCTCCACAAAGGATGTCCAAGGGTTGAGGCAATACATTTCTTCTCAATTTATGAAGAAGACCCTTCTCACAGTCAGACATTACTAACTTTTGCCAAGCTAGATTTCAACCACTTGCAGAAAGTTCATCAACTAGAACTAAGTGACATCAGCAGGTGGTGGAAGGATTTAGACGTCAAGAATAAAATTCCATATACAAGAGACCGTGTGGTTGAATGCTACTTCTGGATATTGGGTGGAGCTTACTTTGAACCACAATATTACCTAGCTAGAAAGTTCCTAACAAAAGTGATAGCTCTGATTTCTATTATGGATGATACCTACGATGTGTTTGGTACAATAGAAGGACTTCAACTTCTCACAGAAGCAGTGGAAAGGTCTAAATCACAAACTTCAACTTTCAATGTACATTTAATTGTAAATGGAATCATTATGTTAGGTTGTCTCATAAATATGCCCATTTTCAGGTGGGAGGCCGACGCTGCAGATAGCTTACCCCAATACATGCAACATATTTTTGAAGCACTGCTGGCTCGTATTTTGACGAAGCCAAATGGTTCGACCAGATCATACATGCCAACAATGGAAGAATATATGGCACTTGCAACGAAAACCGCCGGCTATTCCATGCTCGTCACTACTTCGTTGGTTGGCATGGGTGACATCGTTACAGAAGAGGCCTTTGAATGGATCTCGAGTGATCCCAAGATTGTCAAAGCTGCCTGTGTGATTTGTAGATTAATGGATGATGTCTTCGAACAAAACAGAGGTCACGTTCCGTCAGCTGTGGAATGCTACACAAAACAACATGGTGTGAGTAAAGAGGTAGCTTTGAAGGTATTCAGAGAAGAAATTAGCAATGCTTGGAAGGATATAAACGAAGTGTATATGCGTCCTACTCCAGTACCTATGCCAATACTCGATCGAATTTTAAATATGATTCGAGTGTTGGGTGTTGTATACAAGGATATAGATAGCTATACACTTGCTGAACTCAAAGATTTCATAACATGGATGCTTATTGAGCCCATGCAAATTAATTAA	1539	0.3983	MNEKLREIEKLKEEMKRMLADPKKIQSEKLELIDSIQRLGVSYHFEKEIENILEQIYQSTKDKCVEKEIHDDLHSLSLWFRLLRQQGYSISSGVFNKFELEEIGLKNSDAYSVKGILSLYEATHLRKHGEHMLDQAHDRVAAYLEALVPSLNPTLKAQVSHALKQALHKGCPRVEAIHFFSIYEEDPSHSQTLLTFAKLDFNHLQKVHQLELSDISRWWKDLDVKNKIPYTRDRVVECYFWILGGAYFEPQYYLARKFLTKVIALISIMDDTYDVFGTIEGLQLLTEAVERSKSQTSTFNVHLIVNGIIMLGCLINMPIFRWEADAADSLPQYMQHIFEALLARILTKPNGSTRSYMPTMEEYMALATKTAGYSMLVTTSLVGMGDIVTEEAFEWISSDPKIVKAACVICRLMDDVFEQNRGHVPSAVECYTKQHGVSKEVALKVFREEISNAWKDINEVYMRPTPVPMPILDRILNMIRVLGVVYKDIDSYTLAELKDFITWMLIEPMQIN*	513

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte15g01946	512	Gene3D	Farnesyl Diphosphate Synthase	345	510	IPR008949	-
	Pte15g01946	512	FunFam	Isoprene synthase, chloroplastic	24	189	-	-
	Pte15g01946	512	Pfam	Terpene synthase family, metal binding domain	194	343	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Pte15g01946	512	Pfam	Terpene synthase family, metal binding domain	353	456	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Pte15g01946	512	PANTHER	OS04G0344100 PROTEIN-RELATED	12	494	-	-
	Pte15g01946	512	Pfam	Terpene synthase, N-terminal domain	4	163	IPR001906	GO:0010333\|GO:0016829
	Pte15g01946	512	SUPERFAMILY	Terpenoid synthases	189	511	IPR008949	-
	Pte15g01946	512	Coils	Coil	1	21	-	-
	Pte15g01946	512	CDD	Terpene_cyclase_plant_C1	1	508	IPR044814	GO:0010333\|GO:0016102
	Pte15g01946	512	Gene3D	Farnesyl Diphosphate Synthase	4	292	IPR008949	-
	Pte15g01946	512	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	5	187	IPR008930	-
	Pte15g01946	512	Gene3D	-	24	189	IPR036965	GO:0010333\|GO:0016829

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte15g01946	Pte-Chr15	25654082	25656305	Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte15g01946	K15803		-	qsu:112020915	494.197

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte15g01946	15	25654082	25656305	Pte15g01946	15	25654082	25656305	RCT