Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01941 ATGGCAGCCATGGCTGCTTTGCAATACTCTATGAGTGCTCTTTCTCTCTCCTCTAGCTCATTCCTGGGGCAACGTCTGTCACAATTCACTCAGCCCCCCGTTCTGGTGACTACAACATATAAACCATGTCTCATTGTGATGAAGCTCAAGCATTGGGAGAGAAAAGAATGCAAACCAAACAGCCTCCCGGTTTTGCACAAAATGCATGTTAAGGTTGGTGATATGGTAAAAGTCATAGCTGGACGTGACAAAGGTAAAATTGGAGAGATAGAACAAATCTTTAGGCATAACAGTACTGTAATAGTCAAAGACATAAACTTGAAGACCAAGCATGTGAAGCCTAAAGAAGAGGGTGAACAGGGGCAAATTATCAAGATTGAAGGTCCCATCCACAGTTCCAATGTGATGCTTTACTCAAAAGAGAAGGAAGTAGCAAGTCGTGTAGGCCATAAAGTTCTTGAAGATGGAACACGAGTTCGTTTCCTGATAAAAACTGGGGAGATAATTGACAGCTCTGAGAAATGGAAGAGTCTAAAGGAAGAGAAAAGTAAAGCTCAAGTAGCTACTGATTCGGCATCATGA 582 0.4227 MAAMAALQYSMSALSLSSSSFLGQRLSQFTQPPVLVTTTYKPCLIVMKLKHWERKECKPNSLPVLHKMHVKVGDMVKVIAGRDKGKIGEIEQIFRHNSTVIVKDINLKTKHVKPKEEGEQGQIIKIEGPIHSSNVMLYSKEKEVASRVGHKVLEDGTRVRFLIKTGEIIDSSEKWKSLKEEKSKAQVATDSAS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01941 193 NCBIfam 50S ribosomal protein L24 67 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pte15g01941 193 Gene3D - 63 168 IPR014722 -
Pte15g01941 193 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 105 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pte15g01941 193 SMART kow_9 69 96 IPR005824 -
Pte15g01941 193 ProSitePatterns Ribosomal protein L24 signature. 73 90 IPR005825 GO:0003735|GO:0005840|GO:0006412
Pte15g01941 193 Pfam KOW motif 72 103 IPR005824 -
Pte15g01941 193 CDD KOW_RPL26 73 137 IPR041988 GO:0003723
Pte15g01941 193 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 22 178 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pte15g01941 193 Hamap 50S ribosomal protein L24 [rplX]. 68 164 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pte15g01941 193 SUPERFAMILY Translation proteins SH3-like domain 66 168 IPR008991 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01941 K02895 - egr:104450199 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01941 15 25542827 25545539 Pte15g01941 15 25542827 25545539 RCT