Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01931 ATGAGGAATGATGGCAAGAGAGAGCATCAGGGTGGCGTTCCTCGATCAGGCCGGACTAATGGCTTTATTCCCAGTTCCTTTCGTGCTATTTCAAGCTACATGAGGATTGTTTCCTCTGGTGCTTCAACAGTTGCGAGGTCCGCTGTCTCGGTGGCATCGTCAATTGTGGACCAAGATGATGATGACAACCATGATCAGGTGATATGGGCTGGATTTGACAAGTTAGCTTGTGAAAGAGAAGTTCTTCGGAGAGTTCTTCTTCTGGGTTATCGTTCTGGGTTTCAAGTTTGGGATGTTCAAGATGCGGATAATGTTTGTGACCTGTTCTCAAAACATAGTGGTCCTGTTTATTTCATGCAAATGCTTCCTAAACCACTTCCGGAGAAGAAATTGAATGATAAGTTTGCTGATCATCGCCCACTTTTGGTCGTTTGTATGGATGGAAGTGCTTCAAACTGCCATGACCAAGTCAATAGCAACTTTATGCCGACAATTCTTCAATTTTATTCTTTGAGGTCACAATCTTATGTTCATGTACTCAAGTTCAGGTCGATTGTTTACTCTGTAAGATGCAGTTCACGAGTTGTCGCTATTTCTCAATCAACTCAGATACACTGTTTTGATGCCGCAACATTAGAAAGGGAATATACTATAATCACAAATCCTATAAGTGTTGGATGTCCTGGTTCTGGAGCTATAGGTTATGGGCCACTTGCAGTGGGTCCCAGATGGCTGGCTTACAGCGGTAGCCCCATCGCAGCCTCCAATTCTGGGCGTGTCAGTCCACAACACTTAACACCTTCTGCCAGCTTTCCTGGATTTTCTTCAAGTGGGAGTCTTGTTGCACACTATGCTAAAGAATCTAGCAAACAACTTGCAGCTGGGATTGTAACCCTTGGAGACATAGGCTATAAGAAGCTTTCCAAATACTGTTCTGAGTTGTTACCTGATAATGAAAATTCAGTCCCATCCGGAAATCCAGGCTGGAAGGTAAATGGAACCATAAACGGCTATTCAGGTGACAGCGAAAATGTTGGAATGGTCATAGTTAGAGATATGGTCAGTAAAATTGTGATTGCGCAATTCAGGGCTCACAAAAGTCCTATTTCAGCCTTATGCTTTGACCCTAGTGGCACCCTTTTGGTCACAGCTTCAATTCAGGGGCATAACATAAATGTGTACAAGATAATCCCTGGGTATCATGGAAGTTCATCATCATCTGATACTACCACGTCTTACGTGCATCTGTATAGACTGCAGCGAGGCTTTACCAATGCGGTCATTCAGGACATAAGTTTCAGTGACGACAGCAACTGGATTGTTATTAGTTCCTCAAGGGGCACTAGCCATCTTTTCGCTATAAATCCTTATGGAGGATTTGTAAATATTCAATCTGGCAATGGTAATGTGACTCCAAAAAATAGGAGATTTGATGTCATGACTAATCCAGCACTTCAGCTTCCTAGTTTAGGTGTGCAATTGCCTCATCAACAAACCCTGATGATGGCTGGTCCTCCAGTTACACTTTCTGCCGTGACCAGAATTAGGAATGGAGACAATGGCTGGAAAGGCACCGTCACTGGTGCTGCAGCAGCTGCAACTGGTAGAGTGGGTTCATTTTCTGGTGCAATTGCTTCTTGTTTTCACAACTGCAGAGGGAATTCTTTGCTTCATGCTTCCAACTCTTCAAAGACAAAGTTCCACATGTTGGTCTTTTCACCGGTTAGCTGTATGATACAATATGAGATGCATGTATCAAGTGGTCTTGACTCAGGGGCTATTCCTGTTACAACTGCTATACATGAATCAGCTCCTGACAATGATGCAAGATTAGTAGTTGAGGCTATCCAGAAATGGGGTATTTGTCAGAGAAACAACAGGAGGGAGCAGGCAGATAATATTGACATTTACGGTGAGAATGGAATTTCAACCAGCAATAAGATTCATCCAACGGAAGAAATGGAAGATGGAAACGTTATTAGTAATGAAACCAAGAACAACATGGTGAAATCAAGTGTCAATTTGGAGGAGAAACATCATTTGTATATTTCAGAAGCTGAATTGCATATGCATCAAGCTAGGACCCCGATATGGGCTAAGCCAGAGATCTACTTCCAGTCAATGATGATGGGTATTGAAATGGATGCTGGAACATCTCAAGTTGGAGAAATGGAAATAGAAAGGATCCCTACTCGCATGATAGAACCTAGGACAAGAGGCTTGATTCCTGTCTTTGACTATATTCAGACTCCAAAACACCAAAAAACCAGGGTTTCTGCTATAGATAGCAAGAACACGGCACAACTGCTGCATCAGAATTCTAGGCTCTCTGAAAATGGTGGGATTTCTTCTACGACTAACTCTGTGTCTCCTCGATGTTCTACAAATTCAGGTGAAACAATGCTTGAATTTCGAAGTGGCATGGATGGAAATGAATGGTATAGGTCACAGATGCCATCAGATACGAAGGACTCTGTTAATTATAATGACAAACCAAAGCCAAATACTCAGCTTGAGATTGTAAATAATAGGAAGAACTTAGATACAAATGCTGAGCTCAAGTTTGTAAATAGAAACACAGAAGGACTAGAAACGCACAATCAATTTGAAGATCGAAGCGGTGATTATGACTAG 2634 0.4226 MRNDGKREHQGGVPRSGRTNGFIPSSFRAISSYMRIVSSGASTVARSAVSVASSIVDQDDDDNHDQVIWAGFDKLACEREVLRRVLLLGYRSGFQVWDVQDADNVCDLFSKHSGPVYFMQMLPKPLPEKKLNDKFADHRPLLVVCMDGSASNCHDQVNSNFMPTILQFYSLRSQSYVHVLKFRSIVYSVRCSSRVVAISQSTQIHCFDAATLEREYTIITNPISVGCPGSGAIGYGPLAVGPRWLAYSGSPIAASNSGRVSPQHLTPSASFPGFSSSGSLVAHYAKESSKQLAAGIVTLGDIGYKKLSKYCSELLPDNENSVPSGNPGWKVNGTINGYSGDSENVGMVIVRDMVSKIVIAQFRAHKSPISALCFDPSGTLLVTASIQGHNINVYKIIPGYHGSSSSSDTTTSYVHLYRLQRGFTNAVIQDISFSDDSNWIVISSSRGTSHLFAINPYGGFVNIQSGNGNVTPKNRRFDVMTNPALQLPSLGVQLPHQQTLMMAGPPVTLSAVTRIRNGDNGWKGTVTGAAAAATGRVGSFSGAIASCFHNCRGNSLLHASNSSKTKFHMLVFSPVSCMIQYEMHVSSGLDSGAIPVTTAIHESAPDNDARLVVEAIQKWGICQRNNRREQADNIDIYGENGISTSNKIHPTEEMEDGNVISNETKNNMVKSSVNLEEKHHLYISEAELHMHQARTPIWAKPEIYFQSMMMGIEMDAGTSQVGEMEIERIPTRMIEPRTRGLIPVFDYIQTPKHQKTRVSAIDSKNTAQLLHQNSRLSENGGISSTTNSVSPRCSTNSGETMLEFRSGMDGNEWYRSQMPSDTKDSVNYNDKPKPNTQLEIVNNRKNLDTNAELKFVNRNTEGLETHNQFEDRSGDYD* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01931 877 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 14 860 IPR045142 GO:0006914
Pte15g01931 877 MobiDBLite consensus disorder prediction 777 798 - -
Pte15g01931 877 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g01931 877 Pfam WD domain, G-beta repeat 361 386 IPR001680 GO:0005515
Pte15g01931 877 SUPERFAMILY WD40 repeat-like 85 455 IPR036322 GO:0005515
Pte15g01931 877 Gene3D - 82 471 IPR015943 GO:0005515
Pte15g01931 877 MobiDBLite consensus disorder prediction 815 835 - -
Pte15g01931 877 Pfam Breast carcinoma amplified sequence 3 504 743 IPR022175 -
Pte15g01931 877 SMART WD40_4 173 208 IPR001680 GO:0005515
Pte15g01931 877 SMART WD40_4 412 453 IPR001680 GO:0005515
Pte15g01931 877 SMART WD40_4 355 395 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01931 Pte-Chr15 25440824 25449451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01931 - - qlo:115955563 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01931 15 25440824 25449451 Pte15g01931 15 25440824 25449451 RCT