Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01929 ATGCACGTTGCCAAATCCAAAGAGTTAACCACCAAACTTGTTTCAGCCATAAAATCAAACAGCTTGTACTCAAGTCTCTCGTCCACAGGCAACAAAACCCGAAAGAATTTCCTTCCTTCGCCAGTTATTATTTCACGGAGTTTTTCAATTTACAGATGCTTTGTTAAGAATTCAGATGAACGAGATTCAGTGAAGGGCGTGAAAGAAGACCTTACATTCTCAATTTTCAATCTGTCATCTGAATCAGCATCTCCTTCAAGGGCAAGTGATGACTCAGATGATTCACGTGTTCCAGAAGGAATTGATTATAGTGAGAAGAGTGTGCAAAATCTAGAAGATGATCAATGGCTCAAAAAGATAGCTCATTGTAATATGTCAATATTTCGGAAAGACAGCGCTCGAGAAAGAAAAGTAGATTTTGTTTTCAAATATACACAGGGAGGTAAACTTAAAAAATTGGTTCAACGTTGTCAGAGCAAGTTGGGATCAGAGACTGTTGTTGATGTGTTTGGTAAATTGGGACAAGGGGTTGATGAGAAAGAATATAATGCATCACTAAAAGCACTTGTAGTATCAGCTATGGCGAGCGAAGATGGAAATTTTGCATCAGAGCAGATGACAAAGGCTTGTCACATCTTCAACGAAATGATGGAGCAAGGATTTTTTATAGAAGAGGATACATATTGCCCAATACTTATGTATTTAATTGAAAAGGGAATGGTTGAAGAATTTCACGCCTTTTCAGAGGTTATTAGAGAATGCAACCTTTGTTCTGTTTCTAGACTGGCTTACTATGAGATGTTGTTATGGCTGGCTATAAAAAAAGAAGAAAAGATTGAGGAACTTTTAAATAATGTTGCAGTCAATGATGGCAAAGACAATTACAAATTACAAGAAAGCTATTTACTTGCTCTCTGTGACTATGACCAGAAAAAGGAACTTCTGCAGTTGTTGGAACTTATAGACATAACAAAGCTGTCACTAACTGACTGTGTGACACATGTATTCAAGTCATTAGGAAGATTGCAACTAGAACCTTATGCTGAGAAGTTGCTTTCAGCCTTGCAAGGATCTGGTTGTGATGCGAAGATGATAACTAATTTTATCACTACATATTTCATTGGTCATCTTAATTCACAGGTTGAGGATATTAAAAGATTCAAGGAGTTACACAAGAAACTGGATGTTTCACCTTCATCATCTTCTTATGTGAAGCTCATTCAGTATGCTTGCGAGTCATTCAAGGTGCATGTGGCACTTGATCTTTTCAATGAACTATGTGAATGTGAATTGGATTTGAACTTATCAATTAAGGTGTTGAACTTCATTCTACGAGCAGCTGAGGACTACCATGAATACAATTTGGTTCGGAAAGCCTATTCAATGATTAGCTGCCGCAATTTGTTGGCAAATGCTGAAACGTTCAGTATTATGATAACTTTATTTGTGAAAATGAAAGATTTTGCTGGTGCATATAAGGTGCTTGATGATGTGAATAAAACAAATTTGAAACCCACTTCAAAAATGTACAATGCCATAATGGGAGGATATTTCCGAGAGAAAAATATTTGTGGCGCATTGATGATTTTTGAGAAAATGAAGAAGGCAGATGTAAAACCTGATGCACTGACTTACAGCTATCTGATAAACAACAGTAAGACTGAAGAAGATATTCGCCGGTATCATGAAGAGCTGCAACACTCCGGTCTACAAATTACCAAGCACGTTTATATGGCTCTTATAGATGCATATGCAGCTTGTGGTCAGTTTGAGAAGGCCAAACAGGTTGTCACTGATGAAGCAATACCAGATTACAGCCTTTCTGAGATTAAGAGCGTGCTAGTGTCAGCTCTGGCATCACATGGGCATATATCTGAGGCTTTAGATGTTTATGAAGAAATTAAGCAAACTGGAAACTATCTGGAACCTAAAGCAATCATAAGGCTATTGGAGCATGCAGAGTCTGAAAGCGAAAAGCCAGCCAAGGAAGAGTTGCAGAAAAGGCTTATTCTATTGCAAGAATTGCATGGTTCAGAATATTGGATAGATGGTTGTTTAAGAACTATCTTCGATTGTGTTAGGAACAAAAATATCAGTCTTGCTTGTGATTTGTTCAAGCAACTCAAGGATAAATTACCTAGCGATGAAATTCGTATGGAAGTGTTTTTCGATGAGGTGTTTTGTCTGATTGGAGAGTCAGAACCCTCTCTATTGGAATTAGGTAAGATCTTGCTTCAATTCATGAAGAAGCAGCTCAAGATCATGCCTTCACGAAAGAGTCTTGATTTTCTTCTTGATGCCTGCATTAAAGTGAGAGATATAAAAAGTGCACATTTAATTTGGAAGGAATATGAAGTTGCTGGACTTCTTTATAATGGTATAAGTTTCTTGAGAATGTACCAGGTTCTTTTAGCATCGGGAGACCATAAGGCTGCAAAATTTATGCTTAAGAAGATCCCAAAAGAGGATCCCCATGTTCGCTTGATAATCAAAGCATGCCAAAAAACTTATAAACCTTCTAAGAAAAAAAAGAAAAAAAAAGCACGAGGTAAAGTAAAATATAAAGGGAAAATATGCTCGAATGAGTGA 2589 0.3712 MHVAKSKELTTKLVSAIKSNSLYSSLSSTGNKTRKNFLPSPVIISRSFSIYRCFVKNSDERDSVKGVKEDLTFSIFNLSSESASPSRASDDSDDSRVPEGIDYSEKSVQNLEDDQWLKKIAHCNMSIFRKDSARERKVDFVFKYTQGGKLKKLVQRCQSKLGSETVVDVFGKLGQGVDEKEYNASLKALVVSAMASEDGNFASEQMTKACHIFNEMMEQGFFIEEDTYCPILMYLIEKGMVEEFHAFSEVIRECNLCSVSRLAYYEMLLWLAIKKEEKIEELLNNVAVNDGKDNYKLQESYLLALCDYDQKKELLQLLELIDITKLSLTDCVTHVFKSLGRLQLEPYAEKLLSALQGSGCDAKMITNFITTYFIGHLNSQVEDIKRFKELHKKLDVSPSSSSYVKLIQYACESFKVHVALDLFNELCECELDLNLSIKVLNFILRAAEDYHEYNLVRKAYSMISCRNLLANAETFSIMITLFVKMKDFAGAYKVLDDVNKTNLKPTSKMYNAIMGGYFREKNICGALMIFEKMKKADVKPDALTYSYLINNSKTEEDIRRYHEELQHSGLQITKHVYMALIDAYAACGQFEKAKQVVTDEAIPDYSLSEIKSVLVSALASHGHISEALDVYEEIKQTGNYLEPKAIIRLLEHAESESEKPAKEELQKRLILLQELHGSEYWIDGCLRTIFDCVRNKNISLACDLFKQLKDKLPSDEIRMEVFFDEVFCLIGESEPSLLELGKILLQFMKKQLKIMPSRKSLDFLLDACIKVRDIKSAHLIWKEYEVAGLLYNGISFLRMYQVLLASGDHKAAKFMLKKIPKEDPHVRLIIKACQKTYKPSKKKKKKKARGKVKYKGKICSNE* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01929 862 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 506 540 IPR002885 -
Pte15g01929 862 MobiDBLite consensus disorder prediction 837 862 - -
Pte15g01929 862 Pfam PPR repeat 613 636 IPR002885 -
Pte15g01929 862 Pfam PPR repeat 576 596 IPR002885 -
Pte15g01929 862 Pfam PPR repeat family 506 550 IPR002885 -
Pte15g01929 862 Gene3D Tetratricopeptide repeat domain 685 861 IPR011990 GO:0005515
Pte15g01929 862 Gene3D Tetratricopeptide repeat domain 406 555 IPR011990 GO:0005515
Pte15g01929 862 Gene3D Tetratricopeptide repeat domain 556 674 IPR011990 GO:0005515
Pte15g01929 862 MobiDBLite consensus disorder prediction 81 104 - -
Pte15g01929 862 NCBIfam pentatricopeptide repeat 509 542 IPR002885 -
Pte15g01929 862 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 471 505 IPR002885 -
Pte15g01929 862 MobiDBLite consensus disorder prediction 87 104 - -
Pte15g01929 862 PANTHER OS02G0132600 PROTEIN 12 849 - -
Pte15g01929 862 MobiDBLite consensus disorder prediction 837 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01929 Pte-Chr15 25371895 25400028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01929 387 819 Glycosyltransferase AT1G05670 20.946 3.02e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01929 - - qsa:O6P43_028953 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01929 15 25371895 25400028 Pte15g01929 15 25371895 25400028 RCT