Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01705 ATGGGGGATCGATTTAGGTCAATTTCTATCGATGAATTGCCATCCCACCTGATTCTAGAGATTGTAAGTTCGGGCAGGCTCAGTGCAATTGATCTAGTTAGTTTGGAGTTGACTTCTAAGATTTTCCGTGGAAGTCACGGCTTATATCCTTACAAGTTTCCATCATTGGTTGAGTTTGCGGCATTTCAGCTGTGTGGCTCACATATTATATATTCGAGGATGAGTTTGAATGCACAAAAGGAGTTATTTGATCGGTGTGGTTGGAACTGGAAGCGAGTTTTGCGTTTCTTGCAATCTGTAGAACAGTCTTCTGAGATGGTTGAGACATCAGCAGGCAATATGCAAATCACAACCGGGAAGTATCACACCTTTTTAATCGGCAATTCATCAGTATATTCTTGTGGTTCTAGTTTATGTGGTGTTCTTGGACATGGACCAGAAACAACACAGTGTGTATCATTTACCAGGATTACTTTCCCACCTTTGGCACGTGTGGTCCAGGTGTCAGCCTCCCATAACCATGCAGCTTTTGTATTGCAGTCAGGAGAGGTATTCACATGTGGTGAAAATTCTTCATTTTGTTGTGGGCATAAAGATACTAGCCGACCCATATGCAGGCCAAGGCTTGTTGAAGCATTAAAGCGAATTCCTTGCAAGCAGGTTGCAGCAGGACTGAACTTCACTGTCTTTCTGACTAGACAAGGCCATGTGTACACATGTGGAAGCAACACCTATGGCCAGCTTGGTCATGGCGATACGCAGGACAGACCAACTCCAAAAATTATTGAAATGCTTGAGGAAGTTGGTTTTGTAGCTCAAGCTGCAGCTGGTCCAAGTTATGTCTTAGCCGTAATTGACAATGGAAGTGTCTACTCTTTTGGATCAGGTGCAAATTTTTGTCTTGGCCATGGAGAGCAGCACAATGAGTTCCAACCACGCATTATTCAGAAATTTAGGAGAAAAGGTATTCATGTGGTCTGTGTCTCAGCTGGTGATGAGCATGCTGTTGCCCTTGATTCAAACGGAACAGTTTACACTTGGGGCAAAGGCTATTGTGGTGCTTTGGGTCATGGAGATGAGCTTGACAAGACAACTCCTGAAATTCTGAAGGGTCTTAAGAACCACTTGGCTGTGCAGGTATGTGCTAGAAAGAGGAAAACTTTTGTTTTGGTTGATGGTGGTTCAGTCTATGCCTTTGGATGGATGGGCTTTGGCAGCCTTGGTTTCATAGACAGGGGAGTATCTGATAAAGTGATGATGCCACGAGTTCTTAATACATTAAGAGCTCATCAGGTTTCTCAAGTTAGCACAGGGCTTTATCACACTGTAGTGGTCACAAAGCGAGGTCAGATATTTGGTTTTGGGGACAACGAAAGGGCGCAACTTGGACATGATAGCTTGAGAGGATGCCTAGAGCCAACTGAAATTTTTATTGAAGAGCAATGTGAAGATTTTAGAATTTTGAAGGATGACGCGATTATAAACGTCCTGCAATGGAGTTTGTGA 1506 0.4343 MGDRFRSISIDELPSHLILEIVSSGRLSAIDLVSLELTSKIFRGSHGLYPYKFPSLVEFAAFQLCGSHIIYSRMSLNAQKELFDRCGWNWKRVLRFLQSVEQSSEMVETSAGNMQITTGKYHTFLIGNSSVYSCGSSLCGVLGHGPETTQCVSFTRITFPPLARVVQVSASHNHAAFVLQSGEVFTCGENSSFCCGHKDTSRPICRPRLVEALKRIPCKQVAAGLNFTVFLTRQGHVYTCGSNTYGQLGHGDTQDRPTPKIIEMLEEVGFVAQAAAGPSYVLAVIDNGSVYSFGSGANFCLGHGEQHNEFQPRIIQKFRRKGIHVVCVSAGDEHAVALDSNGTVYTWGKGYCGALGHGDELDKTTPEILKGLKNHLAVQVCARKRKTFVLVDGGSVYAFGWMGFGSLGFIDRGVSDKVMMPRVLNTLRAHQVSQVSTGLYHTVVVTKRGQIFGFGDNERAQLGHDSLRGCLEPTEIFIEEQCEDFRILKDDAIINVLQWSL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01705 501 CDD F-box_SF 11 43 - -
Pte15g01705 501 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 342 393 IPR000408 -
Pte15g01705 501 SUPERFAMILY RCC1/BLIP-II 111 409 IPR009091 -
Pte15g01705 501 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 288 341 IPR000408 -
Pte15g01705 501 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 234 IPR000408 -
Pte15g01705 501 SUPERFAMILY RCC1/BLIP-II 378 477 IPR009091 -
Pte15g01705 501 Pfam Regulator of chromosome condensation (RCC1) repeat 235 284 IPR000408 -
Pte15g01705 501 Pfam Regulator of chromosome condensation (RCC1) repeat 341 382 IPR000408 -
Pte15g01705 501 Pfam Regulator of chromosome condensation (RCC1) repeat 287 338 IPR000408 -
Pte15g01705 501 Pfam Regulator of chromosome condensation (RCC1) repeat 181 231 IPR000408 -
Pte15g01705 501 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 435 445 IPR000408 -
Pte15g01705 501 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 164 476 - -
Pte15g01705 501 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 235 287 IPR000408 -
Pte15g01705 501 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 394 448 IPR000408 -
Pte15g01705 501 Pfam Regulator of chromosome condensation (RCC1) repeat 432 460 - -
Pte15g01705 501 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 328 338 IPR000408 -
Pte15g01705 501 Gene3D - 321 493 IPR009091 -
Pte15g01705 501 Gene3D - 86 320 IPR009091 -
Pte15g01705 501 PRINTS Chromosome condensation regulator RCC1 signature 435 451 IPR000408 -
Pte15g01705 501 PRINTS Chromosome condensation regulator RCC1 signature 344 360 IPR000408 -
Pte15g01705 501 PRINTS Chromosome condensation regulator RCC1 signature 451 465 IPR000408 -
Pte15g01705 501 PRINTS Chromosome condensation regulator RCC1 signature 289 305 IPR000408 -
Pte15g01705 501 PRINTS Chromosome condensation regulator RCC1 signature 325 338 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01705 Pte-Chr15 17618233 17623201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01705 - - qsa:O6P43_029079 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01705 15 17618233 17623201 Pte15g01705 15 17618233 17623201 RCT