Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01652 ATGTCTTCCACTACTCGAATCAGTGTGACCTCCTTTACCCTCCTCTTGCTTCTCATACAAAACACTCCATCCCATGCTCGTTTAGGATCCTACCAATCATCCGCATCGGATTTCGAATCAGCATCTGATCTGGTATCTGATGGGGTCAACCATGGTTCGAGACCTCCGCCTAACCATCTGCTCCTACCACATCAGCAACCGTTGGCTGTGGCTGGGGAGTCATCTTCAGAACCGGAGCCTACTTGCGAGCAGACATATGGTTTTTTGCCCTGCACCACCACTGTGCTGGGTAACTTGTTCTTGATCCTTGTGTATGGCTATCTGATGTTCCTAGCTGCCAGGTACTTGTCGACAGGCAGCGAGCTTTTGCTTGAGATCTTAGGTCCTGGCATTGTTGGTGGACTGTTCCTCCCCATACTTGGTGCTCTTCCAGACGCAATGCTAATTCTGGTGTCTGGATTGTCGGGAAGCAAAGAAGCTGCTCAAAGTCAGGTTTCTGTTGGAATGGGCTTGCTGGCTGGTTCAACCGTTTTACTACTGACAATAATATGGGGAACCTGTGTCATTGTTGGCAAGTGTGACATTGTGGATTCTATTGCTGTAGATTCACAAGATACCAGAGGGTTCAGCTTATTTGGTTCTGGTGTTAGTACTGATATTTGGACAAGCTATGCCGCAAGGATTATGGTTATATCTGTCATTCCATTTTTGATTGTTCAGTTTCCACAAATTCTCAATTCATCTTCGGGGAGGCACTTGGCTGTATTAATTGGGCTCATCGGTTCAGTGCTTCTATTAATTACTTATTGCCTTTACCAGATCTTTCAACCCTGGATACAGAGGAGAAAGCTTGATTACGTGATGCACAAGCATGTGATTTTAGGACTTCTGAAGTACTTAAAACAGCGGGCATTGGGAAGGCTGCTAACAGAAGACGGTGAACCTGATCAAGAAGTGATAAAAAAGCTATTTGCTGCTATTGATGAGAACAATGATGGGCATCTCCATGCTAGTGAATTAAGAGCACTGATTGTTGGAATTCGTTTTGAAGAGTTTGACCTTGATCACAACGATGCTGTAAATAAACTCATGAACGATTTTGATACGTCATGTGACGATGCTGTCGATGAAAAAGAATTTGTGAATGGCATCACTAAATGGCTTAACAGGGCTAAGCGGTCTCAAGCTACTACTGGTGCTGGTCCTCACACCATGAAGTTTTTAACTGATTTTCACTTGGAAACCAAGAGAGAGCATGATCTGTTAGATGTCGGGGGTGATGGAGATGAGGAAGCTGAGGGTGTTACTAATGCGAAATCTATTACCGTCAAAGCATTGCTATTGCTGCTTTTGGGGGCAGTCATTGCTGCTGTCTCTGCTGATCCTCTCGTTGATGCAGTGGATAACTTCTCTACTGCAACAAGCATTCCTGCTTTCTTCATTTCATTTATTGCACTACCTTTTGCTACAAATTCAAGTGAAGCAGTCTCAGCAATTATCTTTGCCAGTCGTGATAAGAGGAAAACTGCTTCATTGACATTTTCGGAGCTTTATGGTGCGGTGACAATGAACAACGTTCTCTGCCTGTCTGTATTTTTGGCCCTAGTTTATGTAAGGGGGTTGACGTGGAACTTCTCATCCGAAGTGCTTGTCATTCTGATCGTTTGTCTTGTGATGGGAGTGTTTGCCAGTTTCCGCACTACTTTCCCTCTTTGGACATCTATAATAGCCATACTGCTGTATCCCCTCTCGCTGGCTTTGGTTTATGTTCTTGATTATTTCTTCGGCTGGTCATAG 1797 0.4435 MSSTTRISVTSFTLLLLLIQNTPSHARLGSYQSSASDFESASDLVSDGVNHGSRPPPNHLLLPHQQPLAVAGESSSEPEPTCEQTYGFLPCTTTVLGNLFLILVYGYLMFLAARYLSTGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKEAAQSQVSVGMGLLAGSTVLLLTIIWGTCVIVGKCDIVDSIAVDSQDTRGFSLFGSGVSTDIWTSYAARIMVISVIPFLIVQFPQILNSSSGRHLAVLIGLIGSVLLLITYCLYQIFQPWIQRRKLDYVMHKHVILGLLKYLKQRALGRLLTEDGEPDQEVIKKLFAAIDENNDGHLHASELRALIVGIRFEEFDLDHNDAVNKLMNDFDTSCDDAVDEKEFVNGITKWLNRAKRSQATTGAGPHTMKFLTDFHLETKREHDLLDVGGDGDEEAEGVTNAKSITVKALLLLLLGAVIAAVSADPLVDAVDNFSTATSIPAFFISFIALPFATNSSEAVSAIIFASRDKRKTASLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWNFSSEVLVILIVCLVMGVFASFRTTFPLWTSIIAILLYPLSLALVYVLDYFFGWS* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01652 598 Gene3D - 269 398 - -
Pte15g01652 598 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 85 590 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pte15g01652 598 CDD EFh 320 385 IPR002048 GO:0005509
Pte15g01652 598 SMART efh_1 319 347 IPR002048 GO:0005509
Pte15g01652 598 SMART efh_1 359 387 IPR002048 GO:0005509
Pte15g01652 598 ProSitePatterns EF-hand calcium-binding domain. 368 380 IPR018247 -
Pte15g01652 598 Pfam Sodium/calcium exchanger protein 100 276 IPR004837 GO:0016020|GO:0055085
Pte15g01652 598 Pfam Sodium/calcium exchanger protein 445 589 IPR004837 GO:0016020|GO:0055085
Pte15g01652 598 FunFam Sodium/calcium exchanger NCL2 434 591 - -
Pte15g01652 598 ProSiteProfiles EF-hand calcium-binding domain profile. 315 350 IPR002048 GO:0005509
Pte15g01652 598 Pfam EF-hand domain pair 318 382 IPR002048 GO:0005509
Pte15g01652 598 SUPERFAMILY EF-hand 314 522 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01652 Pte-Chr15 14630929 14635641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01652 40 599 EF-hand Containing Proteins AT1G53210 68.972 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01652 - - qsa:O6P43_001016 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01652 15 14630929 14635641 Pte15g01652 15 14630929 14635641 RCT