Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01631 ATGGCTGGGTATAGAGCGGACGACGACTATGATTACCTCTTCAAAGTAGTGTTGATTGGGGATTCAGGTGTTGGAAAGTCCAATCTACTCTCCAGGTTCACTAAGAACGAGTTCAATCTCGAGTCCAAGTCCACCATTGGTGTTGAGTTCGCTACTCGAACTTTAAATGTTGATAGTAAAGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAGGAGAGGTATCGTGCTATTACCAGTGCATACTACCGTGGAGCTGTTGGCGCACTTCTTGTTTATGATGTTACCCGTCATGCAACATTCGAGAATGTTGATAGATGGCTGAAAGAATTACGTAACCACACTGATCCAAACATTGTTGTTATGCTCGTGGGTAATAAATCAGATCTTCGCCACCTTATAGCTGTCCCGACCGAAGATGGGAAGTCCTATGCTGAAAAAGAATCACTATATTTCATGGAGACCTCTGCCCTGGAAGCAACCAATGTGGAAAATGCATTTGCTGAAGTTCTCACGCAGATATACAGAATTGCTATCAAGAAGGCTCTTGAGGGAGGAGAAGACGGAAATGCTGCATCAGCCCCGACAAAAGGAGAGAAAATAGACATAAAAAGCGACGTGTCTGCTCTGAAAAGAATTGGCTGTTGCTCGACTTAA 657 0.4384 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLIAVPTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIAIKKALEGGEDGNAASAPTKGEKIDIKSDVSALKRIGCCST* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01631 218 SMART ran_sub_2 19 213 - -
Pte15g01631 218 SMART ras_sub_4 11 177 - -
Pte15g01631 218 PANTHER DRAB11-RELATED 7 201 - -
Pte15g01631 218 Gene3D - 6 216 IPR027417 -
Pte15g01631 218 ProSiteProfiles small GTPase Rho family profile. 7 178 - -
Pte15g01631 218 FunFam ras-related protein RABA1f 6 216 - -
Pte15g01631 218 PRINTS Transforming protein P21 ras signature 152 174 - -
Pte15g01631 218 PRINTS Transforming protein P21 ras signature 55 77 - -
Pte15g01631 218 PRINTS Transforming protein P21 ras signature 37 53 - -
Pte15g01631 218 PRINTS Transforming protein P21 ras signature 14 35 - -
Pte15g01631 218 PRINTS Transforming protein P21 ras signature 117 130 - -
Pte15g01631 218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 177 IPR027417 -
Pte15g01631 218 ProSiteProfiles small GTPase Rab1 family profile. 9 216 - -
Pte15g01631 218 ProSiteProfiles small GTPase Ras family profile. 2 218 IPR001806 GO:0003924|GO:0005525
Pte15g01631 218 SMART rab_sub_5 14 177 - -
Pte15g01631 218 Pfam Ras family 15 175 IPR001806 GO:0003924|GO:0005525
Pte15g01631 218 NCBIfam small GTP-binding protein domain 12 170 IPR005225 GO:0005525
Pte15g01631 218 CDD Rab11_like 11 175 - -
Pte15g01631 218 SMART rho_sub_3 16 173 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01631 Pte-Chr15 14379742 14382669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01631 K07904 - qsa:O6P43_029195 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00451 17 5890848 5892887 Pte15g01631 15 14379742 14382669 RCT
Pte15g01631 15 14379742 14382669 Pte15g01631 15 14379742 14382669 RCT