Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00108 ATGCAATGCAAGAGAAAATCACGTAAAAATGGGTCTCATTCATCATTATCTTTACTGAGGAAGGAGCTGAGGCAAATACATTTACAGTCCCTTTTCGGTGGGTCGTCTTTCGCAGTCTCAACATCCAATTCAGCACCTGATCCGTTGTTGTCATCATTCATATTGCCTATAGCCGATGAATTTGTCAACATACAATCTCAGCCTCTCCCTGAAAAAAAGTTAGTCAAAGCCTCAAATGGGAGTGTCACAAAACGGAATGTCCCGTCTGCCATGTCAGCCAAAGATCAGAAAGAGAAAGCAAAAAGAATCGAGTTTGTTCAGGGGCTATTGCTGTCTATCATATTTGACGATAACGATAATTTATGA 366 0.4071 MQCKRKSRKNGSHSSLSLLRKELRQIHLQSLFGGSSFAVSTSNSAPDPLLSSFILPIADEFVNIQSQPLPEKKLVKASNGSVTKRNVPSAMSAKDQKEKAKRIEFVQGLLLSIIFDDNDNL* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00108 121 MobiDBLite consensus disorder prediction 75 95 - -
Pte15g00108 121 Pfam Stress-induced protein Di19, C-terminal 16 114 IPR027935 -
Pte15g00108 121 PANTHER PROTEIN DEHYDRATION-INDUCED 19 4 116 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00108 Pte-Chr15 829435 831605 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00108 - - qsa:O6P43_007448 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02029 18 30630531 30636673 Pte15g00108 15 829435 831605 RCT
Pte15g00108 15 829435 831605 Pte15g00108 15 829435 831605 RCT
Pte15g00108 15 829435 831605 Pte18g02029 18 30630531 30636673 RCT