Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01275 ATGCAACTTGGTGGCACCTTCCCTATCCAGCTCATGAAGTCCTGTTGTTGGAGTTTGACATGTCCCCTTGCAAACAAACTCTCACGTAAACTTCTCCATTACACTCATCACTCTCTAACCCTTAAAATTCCTATCTACAAAAACCCCATAGGAACTCATTCACTCCAGCACAGCACTAGCTCTCTCTCTCTCTCTTCCTCCCCCCCCCCCTTCTCTCTCTCTCTTTGTTATTACATATCTCTGAATCTCATAGCCACACAAAACTTCCCTTCAAAAATGAGAGAAATCCTCCATATTCAAGCTGGACAATGTGGCAACCAAATTGGTGGCAAGTTCTGGGAGGTTATGTGTGATGAGCATGGCATTGATGCCACTGGAACTTATGTGGGCAACTCTCACCTTCAACTTGAGAGGGTTAATGTTTACTTCAATGAGGCAAGTGGTGGACGCCATGTTCCTAGAGCTGTGCTGATGGACCTTGAACCAGGTACCATGGATAGCCTTCGAGCTGGACCTTATGGAAAGATCTTCAGGCCTGATAACTTCGTTTTCGGCCAAAATGGAGCTGGGAATAACTGGGCTAAAGGCCATTATACTGAGGGAGCTGAGCTAATTGACTCCGTCCTTGATGTTGTTCGTAAAGAAGCTGAGAATTGTGACTGTTTGCAAGGTTTTCAAATTTGCCATTCATTGGGTGGAGGAACAGGATCAGGGATGGGCACCCTGCTAATATCAAAGATCAGAGAAGAATATCCTGATAGAATGATGTTGACATTTTCAGTCTTCCCCTCTCCTAAGGTCTCAGACACTGTGGTTGAGCCCTATAATGCCACACTCTCTGTTCACCAACTTGTGGAAAATGCAGATGAATGCATGGTCCTTGACAACGAAGCACTCTATGACATTTGTTTCAGAACCCTCAAGCTCACAAATCCAAGTTTTGGTGATCTCAACCATTTGATCTCAACTACAATGAGTGGTGTGACATGTTGCCTGCGCTTCCCTGGACAGCTGAACTCTGATCTTCGGAAACTAGCAGTGAACCTCATCCCTTTCCCGCGGCTGCACTTCTTCATGGTTGGCTTCGCACCCTTGACAGCACGAGGCTCACAGCAGTACAGAGCCCTCACAATCCCTGAACTGACTCAACAAATGTGGGATGCGAAGAACATGATGTGTGCTGCAGATCCAAGACATGGTAGGTACCTTACAGCTTCAGCGATGTTCCGTGGCAAAATGAGTACTAAGGAAGTGGATGAGCAAATGATCAATGTGCAGAACAAGAACTCATCCTACTTTGTAGAATGGATACCTAACAATGTCAAATCAAGTGTATGTGACATCCCACCGACTGGGTTGCCCATGTCAAGTACATTCATGGGGAACTCTACTTCGATCCAAGAAATGTTTAGGCGTGTCTCAGAGCAATTCACTGTCATGTTTAGACGAAAGGCTTTCTTGCATTGGTACACTGGCGAAGGCATGGATGAAATGGAGTTTACTGAAGCTGAGAGTAACATGAATGATTTGGTTTCAGAGTATCAGCAATATCAAGATGCAGCTGCTGATGAAGATGGATATGATGAAGAGGATTTGGTGGAGAATTAA 1608 0.4515 MQLGGTFPIQLMKSCCWSLTCPLANKLSRKLLHYTHHSLTLKIPIYKNPIGTHSLQHSTSSLSLSSSPPPFSLSLCYYISLNLIATQNFPSKMREILHIQAGQCGNQIGGKFWEVMCDEHGIDATGTYVGNSHLQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRAGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLPMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAAADEDGYDEEDLVEN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01275 535 PRINTS Beta-tubulin signature 200 218 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 403 421 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 322 331 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 337 350 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 439 462 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 469 480 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 244 256 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 421 435 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 304 316 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 357 373 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 504 522 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 180 191 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Beta-tubulin signature 133 150 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 282 302 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 198 222 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 143 162 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 224 242 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 268 281 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 462 490 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 185 196 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 102 122 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 PRINTS Tubulin signature 243 264 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 CDD beta_tubulin 94 518 - -
Pte14g01275 535 SMART Tubulin_C_4 338 475 IPR018316 -
Pte14g01275 535 FunFam Tubulin beta chain 356 465 - -
Pte14g01275 535 SMART Tubulin_4 139 336 IPR003008 GO:0005525
Pte14g01275 535 FunFam Tubulin beta chain 466 527 - -
Pte14g01275 535 SUPERFAMILY Tubulin C-terminal domain-like 336 520 IPR008280 -
Pte14g01275 535 SUPERFAMILY Tubulin nucleotide-binding domain-like 93 335 IPR036525 -
Pte14g01275 535 Pfam Tubulin/FtsZ family, GTPase domain 95 303 IPR003008 GO:0005525
Pte14g01275 535 Gene3D Tubulin/FtsZ, GTPase domain 93 354 IPR036525 -
Pte14g01275 535 PANTHER TUBULIN 95 518 IPR000217 GO:0005874|GO:0007017
Pte14g01275 535 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 232 238 IPR017975 GO:0005525|GO:0005874|GO:0007017
Pte14g01275 535 FunFam Tubulin beta chain 93 354 - -
Pte14g01275 535 Coils Coil 500 520 - -
Pte14g01275 535 Pfam Tubulin C-terminal domain 353 474 IPR018316 -
Pte14g01275 535 Gene3D Helix hairpin bin 466 521 IPR023123 -
Pte14g01275 535 Gene3D - 355 465 IPR037103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01275 Pte-Chr14 33895050 33897248 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01275 K07375 - pop:7465861 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01275 14 33895050 33897248 Pte14g01275 14 33895050 33897248 RCT