Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01242 ATGAGTATGTGCCACTGTCAGACACCATCTGCTTCCTGCAAATGCAGTATGGACCGACCAAATAAAATCCCAATCACCAAACCGCAGGAGCCCGACATGTTCACCCCTTTGATCCCCAAATTACCAACACACCAACAGCAAATCGAAAAGCCCCATCAAACCCATTTATCTATAGCCCTATCAGAAGCCAAGCGCATAGCTAACATAGCCTTTCCTATGGTGTTGACAGGTTTACTGATTTATTCTCGCTCTATGATATCCATGATCTTCCTCGGTCGCCTCGGTGAGCTCGCCCTTGCTGGTGGCTCCCTTGCAATTGGATTTGCTAATATCACAGGTTACTCTGTCCTCTCTGGCCTGGCTATGGGCATGGAACCTATTTGTGGTCAGGCTTTCGGAGCCAAAAGATTCAAACTTTTAGGCCTTACTCTTCAAAGAACAGTGTTGATGCTTCTTTTAACTTCGATCCCCGTAGCAATTTTGTGGGTTAACATGAACAAGATATTGTTGCTTTTTGGGCAGAAAGCAGAGATAACTAACGAAGCTCAAAGGTTCATTCTTTATTCTCTCCCGGATCTTTTCGCGCAGTCCCTTCTTCACCCATTGCGGATTTACCTTCGAACTCAGTCTATAACCATGCCCCTCACTTACTGTGCTGCTCTTGCGATTCTTCTCCACATTCCCATCAACTACCTTTTAGTCTCTGTGCTTCAACTTGGAATCAAAGGCGTCGCATTGGGTTCTGTTTGGACTAATTTCAATTTGGTAGGATCTTTGGTAGTCTACATTGTAGTCTCGGGAGTGCACGAGACAACTTGGAGCAGGATATCCTCTGAGTGTCTGAAAGGCTGGAGATTGCTCTTGAATTTGGCAATCCCAAGTTGCATATCTGTTTGCCTTGAATGGTGGTGGTACGAAATCATGATTTTACTATGTGGGCTGTTACTTAACCCTCAAGCAACTGTTGCTTCAATGGGTATTCTGATTCAAACAACAGCTTTGATTTATATATTCCCATCTTCTTTGAGTTTTGGTGTGTCAACAAGGGTTGGAAATGAGTTGGGAGCTGACAACCCCAAGCGAGCTAAACTTGCTGCAATTATTGGACTATGTTTTAGTTTCATCTTTGGATTTACTGCATTGTTGTTCTCTGTCCTGGTAAGGAAAGTATGGGCTCGCATGTTCACTCAAGACTCGGAGATTATTGCTCTGACGTCAATGGTATTACCCATTATTGGACTGTGTGAACTTGGGAATTGCCCACAAACAACAGGATGCGGTGTATTGAGGGGGACGGCGAGACCGAAACTGGGAGCAAACATTAACCTAGGTTGCTTTTATCTAGTGGGAATGCCCATTGCAGCGTGGCTAAGTTTCTATGCAGGATTTGATTTCAAAGGCTTGTGGCTTGGTCTTTTAGCAGCTCAAGCTTCATGCGTAGTGACCATGTTGTTTGCTTTGGTTCGTACAAATTGGGAAGAACAAGCCCAGAGAGCCAAGGAACTGACAGCATCCACCTCTGATGAACAGAATCTTAACCAAGAGGTTGAGAAATTGAAGCAAGAGACCGATGAAAATGATTTGAGCTCATCGTCTGATCACATCAACGGCTCCAATGCACTAGTTTGA 1629 0.4444 MSMCHCQTPSASCKCSMDRPNKIPITKPQEPDMFTPLIPKLPTHQQQIEKPHQTHLSIALSEAKRIANIAFPMVLTGLLIYSRSMISMIFLGRLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLTLQRTVLMLLLTSIPVAILWVNMNKILLLFGQKAEITNEAQRFILYSLPDLFAQSLLHPLRIYLRTQSITMPLTYCAALAILLHIPINYLLVSVLQLGIKGVALGSVWTNFNLVGSLVVYIVVSGVHETTWSRISSECLKGWRLLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPQATVASMGILIQTTALIYIFPSSLSFGVSTRVGNELGADNPKRAKLAAIIGLCFSFIFGFTALLFSVLVRKVWARMFTQDSEIIALTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKLGANINLGCFYLVGMPIAAWLSFYAGFDFKGLWLGLLAAQASCVVTMLFALVRTNWEEQAQRAKELTASTSDEQNLNQEVEKLKQETDENDLSSSSDHINGSNALV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01242 542 NCBIfam MATE family efflux transporter 72 469 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte14g01242 542 CDD MATE_eukaryotic 62 498 IPR045069 GO:0042910|GO:1990961
Pte14g01242 542 Coils Coil 502 522 - -
Pte14g01242 542 Pfam MatE 72 232 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte14g01242 542 Pfam MatE 293 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte14g01242 542 MobiDBLite consensus disorder prediction 519 542 - -
Pte14g01242 542 PANTHER MULTIDRUG RESISTANCE PROTEIN 59 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01242 Pte-Chr14 33711955 33713583 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01242 K03327 - qsu:112003859 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01242 14 33711955 33713583 Pte14g01242 14 33711955 33713583 RCT