Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01239 ATGATTAGCGTCGTCTTTATCAACTTTATGCAGGATAGTTGCATTGAGCTTTTCCGTATAGTTTTGTTCAGCGATTGCATTGTGCTTTATGTGTATCAGGTTATCCAGGCAAGGTTACCAAGTGCCATGGACTATGACATTTCCAATGAGCTAGAAGTGCAATCCGGTCTTGTAACAAAAATAAAATTCAGTGTTGCTACTGAAGCTGATATAGAGAAGATATCTGTTTTGGACATCGACACTGCTAGCAAGGTTACTGATCCTGAATTGGGACTTCCAAATCACCCTTCCAAATGCTCCAAATGTGATGCTAAAGACTTAAAACACTGTGAAGGTCATTTTGGAGCCATCACATTTCCGTATACAGTACTTCATCCATATTTTCTATCTGAAGTCACTGAGATTCTGAACAACGTCTGCCCAGGTTGTAAATCTATTCGGCAGGAAGTATGGGCCAAGGATCCTCAGTCTAAAAACAATCAGCCTAGAGGTTGCAAATATTGTGCTGGTGGCAAAAGAAGATTTTATCCAACTATGAAGTTTAAAGTTTCCAGCCAAGAAATCTTCCGTAGAAGTGCAATCATTGTGGAGATATGTGAGAAGATTCCTAAGGGTAAGGTCTTGCCTACTGATTATTGGGAGTTTCTGCCAAAAGATTTGGAGCAAGATGGAAATTGTCTAAAACCTTACAGAAGAATTCTGTCACATGCCCAGGTTCATCAATTGTTAGATGCCGTTGACGTTAAGTTTATCAGAAAGTTTGTTTCTCAAGTTGATTCTATCTTCCTTAACTGCTTCCCTGTGACACCCAATTGTCATCGTGTGACAGAACTTACTAGTGCTGGATCTAATAAACCCCGTTTGATTTTTGATGAGCGGACCAGAGCTTACAAGAAAATTGTTGATTTCAGAGGGATAGCAAATGAGTTGAGTTCTCGTGTTTTGGACTGCCTAAAAATTTCTAAGCTAAACTCAGACAAGACACCAAGTAATAGTTTTGCTCAGATTGAGAAAAAGAAGAATAGTGAATATACTTTCAATACATCTGGTTTAAGATGGATGAAAGATGTAGTTCTTGGGAAGCGCAATGATTATTGTTTCCGCATGGTTATTGTTGGTGATCCTGATCTGAAACTAAATGAAATTGGAATACCATGTCAGATTGCAGAAAGTTTGTTTGTTTCTGAGCATGTTAACAGGCAGAATAAGGAAAAGCTTCTGTACTTCTGTGAGCTGCGTATATTGGAAAAGGGGTATACTTTTGTTCGCAGGGAAGGTAGTCTGGTACGTTTATCTAAAAAGGAACAGCTCAAAATAGGAGATATTTGCTACAGGCCTTTGGTTGATGGTGATCTTGTTTTGATAAACAGGCCGCCATCCATACATCAACACTCTCTCATTGCCTTTTCAGTTAGGGTCCTTCCTATTATTTCTGTCCTATCAATAAACCCTCTTTGTTGTTCTCCTTTTCGTGGTGATTTTGATGGGGATTGCTTTCATGGTTATGTTCCACAATCAATCGATGCTAGGGTTGAACTTCAAGAGCTAGTTGCTTTAGATAGACAATTGATTAATGGACAAAGTGGTAGAAATCTGCTATCTCTTGGTCAGGACAGTTTAGCTGCTGCCTATTTGCTTTTAGAAGATAACAATCTTTTGGATAATTTACAAATGCAGCAGCTCAAAATGTTTTGTCCTCGTCAGATGCCATTACCTGCGATTGTCAAATCTCCTCAACTTAATAGTTCCGTTTGGACCGGCAAGCAACTATTCAGCATGCTCTTACCTCCAGATTTTGAATATTCATATCCTGCAAATAATGTTGTTGTTAGTAATGGTGAACTCCTGTCTACTTCAGATGGATCTGCATGGCTCCGTGATATAGATGGAAATCTCTTCATAAATCTTGTTCGACACTGCAAGAGTAATTCTCTAAATGTATTGTATTCTGCTCAGCAGGTCCTTTGTGAGTGGCTATCAATGAGGGGATTGAGTGTTTCTCTCTCTGACTTATACCTCTCTGACCTTTACTCAAGAAAAAATATGATGGATGATGTCTTTATTGGTTTGAAAGAAGCAGAACATGCATGCAATTTCAAGCAGTTGATGGTGACTTCTAATCAGAATTTCCTTTCTGGAAACTGTGAAGAGAGCGAAAACATAGCAGCTTTTGAAGTGGAAAATTTACATCATGAGAGACAAAAAGCAGCATCACTTAATCAAGCTTCAGTGGATGCTTTTAGAAATGTCTTTCGGGATATTCAAAGTTTAGCTTATAAGTACGGAGCTAGTGACAATTCATTTCTCATTATGTCCAAGGCTGGGAGCAAGGGTAATTTGGTGAGGTTGGTGCAACACACCATGTGCCTTGGCTTGCAACATTCCCTGGTTCAGTTATCATTTAGATTTCCCCATGAGCTATCATGCAATGCTTGGAATCATCTAAAGACGTCTATTGTGGTTGGAGCAGGTAATACACCTCATGCATCGGTTCGGTCTTACATTCCATGTGCTGTGGTTGAGAATTCATTTCTGACTGGATTGAATCCAGTAGAATGTTTCGTTCATTCAGTAACCAATCGAGACAGTTCTTTCAGTGATAATGCTGATCTTCCTGGAACTTTAACCCGAAGGCTTATGTTTTTCATGCGTGATCTATATGCTTCATATGATGGGACAGTAAGAAATGCATATGGAAACCAAGTGGTTCAATTCAGTTATGACTTTGGTATGGACTTGTCATCTGGCAGCAACTCCAATTCTGATTGTGATGCGGAAGAGAGTGTTGATGTTTGGGGTAAGATGGGTGGCCAACCAGCTGGGTCTCTTTCTGCCTGTGCCATTTCTGAAGCTGCATACGGTGCTTTAGACCAACCGATTAGTCTGCTTGAGACATCACCGTTGCTAAACCTGAAGAATATGTTGGAATGTGGTTCAAGGAGAAAAAATGGTGATCAAACTGTGTCTCTGTATTTGTCGCAGAGACTGGGTAGGCAGAGGTACGGCTTTGAATATGGAGCCATAGAAGTACAGAACCATTTGGAGAGAGTGACGTTTTCTGATCTAGTTTCTACTGTTATGGTAATCTTCTCCCCACAAACTGGTGTCGGGAAGCAATTTAGTCCATGGATTTGCCATTTTCATTTGTGCAAGGAAATTCTGAGAAGGAGAAAGTTAAAAGTCCACTCCATTATTGACCGTCTTTACCGAAGATATGATAATTTCAGAATAGAAACAAAATCCAAACTCCAATCCGTGCTTATATCGACCAAGAACTGTGCTTTAGGGGATGCAGCAAAAGATGGCAGCAGTATCTTGTGTATCACAGTTGCAATCCTTGAGAACACCAAGGATTCATTAGTGACACTGGATATTGTTCGAGACAATTTAATACCTTATCTTCTCAAAACAGCTATTAAAGGATTTCAAGAGGTCAAAAAAGTTGAAATCTTGTGGAATGATAGGCTGAAAGTAGCTAAGTCTTGCAAAGCTGATTCAGGTGAACTTTACTTGAGGGTTACTATGTCTGCTAGTGGTGGCAACGCTGGTTTCTGGAATCTATTGAAGAGTGAATGTCTCCAGATAATGAATATGATCGACTGGTCGCGTAGTCATCCAGATAATGTACATCATTTTTGCTCAGCCTACGGAATAGATGCGGGGTGGAAATATTTTCTTAATAATTTTGAATCTGCAATAGCTGATACTGGCAAGACTATTCTTCCAAGGCATTTGATTCTCGTTGCCGACAGCTTATCTGCTACAGGAGAATTTGTTGGCTTAAATTTGAAAGGAATGGCAAGGCAAAGAAAACATGCATCTGTCTCCTCACCCTTCGTGCAAGCCTGCTTTTCTACTCCTGGTGCTAGTTTTCTAAAAGCTGCAAAGGCTGATACTACAGATAATCTCCACGGTATTTTGGATTCAATTGCTTGGGGAAACTATCCTGCAGTGGGGACTAGGGGACAATTTGATCTTATATATGACAGCAAGGGGTACGAGCTCAATAAACCTGTAGATGTCTATGGTATCCTGGAGAAGAGTTCTGACTACATGAGCAGCACCCTTGATGATCACAACCACACCTCTGATAAATGGGGTGCTCCGTTTAAGTACAAAAACAGGAACTTCTCTTTGAAAGGAAAAAATAATTTTGGGACTTGGTCAATACCTACAATTGTAAAACAAATGTTCACATTAAATGATATCCAAAAGTTAGCCCGTGCACTGAGGTTCATTTTGCAAAAGTACCCTGTCAGCCATCAATTAAGTGAATTTGACATGGCTACCTTGAAGCTCGCTTTGAATTTTCATCCGCATAAAGATGAGAAGTTTGGAGCTGGAATTCAGTACATAAAGGTGGGGAACCACCCTAAATATGAGAGCACTCGTTGTTTCTTTATAGTGCGTACAGATGGAACAGTCGAAGATTTTTCATACCATAAGTGTATCCTTGGTGCACTTGAGATTGTTGCTCCCGAGAGAGCTAAAGGATATAGGAGTAAATTTGAAAGACCAGAAATTAGCACCGTGCACTTCAATGGAGATAAGAATGACAAAGTGATTGCAATTGGAGTTGGGGAAGTCCAAGCGTTCTGCACGTGA 4605 0.4 MISVVFINFMQDSCIELFRIVLFSDCIVLYVYQVIQARLPSAMDYDISNELEVQSGLVTKIKFSVATEADIEKISVLDIDTASKVTDPELGLPNHPSKCSKCDAKDLKHCEGHFGAITFPYTVLHPYFLSEVTEILNNVCPGCKSIRQEVWAKDPQSKNNQPRGCKYCAGGKRRFYPTMKFKVSSQEIFRRSAIIVEICEKIPKGKVLPTDYWEFLPKDLEQDGNCLKPYRRILSHAQVHQLLDAVDVKFIRKFVSQVDSIFLNCFPVTPNCHRVTELTSAGSNKPRLIFDERTRAYKKIVDFRGIANELSSRVLDCLKISKLNSDKTPSNSFAQIEKKKNSEYTFNTSGLRWMKDVVLGKRNDYCFRMVIVGDPDLKLNEIGIPCQIAESLFVSEHVNRQNKEKLLYFCELRILEKGYTFVRREGSLVRLSKKEQLKIGDICYRPLVDGDLVLINRPPSIHQHSLIAFSVRVLPIISVLSINPLCCSPFRGDFDGDCFHGYVPQSIDARVELQELVALDRQLINGQSGRNLLSLGQDSLAAAYLLLEDNNLLDNLQMQQLKMFCPRQMPLPAIVKSPQLNSSVWTGKQLFSMLLPPDFEYSYPANNVVVSNGELLSTSDGSAWLRDIDGNLFINLVRHCKSNSLNVLYSAQQVLCEWLSMRGLSVSLSDLYLSDLYSRKNMMDDVFIGLKEAEHACNFKQLMVTSNQNFLSGNCEESENIAAFEVENLHHERQKAASLNQASVDAFRNVFRDIQSLAYKYGASDNSFLIMSKAGSKGNLVRLVQHTMCLGLQHSLVQLSFRFPHELSCNAWNHLKTSIVVGAGNTPHASVRSYIPCAVVENSFLTGLNPVECFVHSVTNRDSSFSDNADLPGTLTRRLMFFMRDLYASYDGTVRNAYGNQVVQFSYDFGMDLSSGSNSNSDCDAEESVDVWGKMGGQPAGSLSACAISEAAYGALDQPISLLETSPLLNLKNMLECGSRRKNGDQTVSLYLSQRLGRQRYGFEYGAIEVQNHLERVTFSDLVSTVMVIFSPQTGVGKQFSPWICHFHLCKEILRRRKLKVHSIIDRLYRRYDNFRIETKSKLQSVLISTKNCALGDAAKDGSSILCITVAILENTKDSLVTLDIVRDNLIPYLLKTAIKGFQEVKKVEILWNDRLKVAKSCKADSGELYLRVTMSASGGNAGFWNLLKSECLQIMNMIDWSRSHPDNVHHFCSAYGIDAGWKYFLNNFESAIADTGKTILPRHLILVADSLSATGEFVGLNLKGMARQRKHASVSSPFVQACFSTPGASFLKAAKADTTDNLHGILDSIAWGNYPAVGTRGQFDLIYDSKGYELNKPVDVYGILEKSSDYMSSTLDDHNHTSDKWGAPFKYKNRNFSLKGKNNFGTWSIPTIVKQMFTLNDIQKLARALRFILQKYPVSHQLSEFDMATLKLALNFHPHKDEKFGAGIQYIKVGNHPKYESTRCFFIVRTDGTVEDFSYHKCILGALEIVAPERAKGYRSKFERPEISTVHFNGDKNDKVIAIGVGEVQAFCT* 1535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01239 1534 Gene3D - 699 848 IPR038120 -
Pte14g01239 1534 Pfam Protein of unknown function (DUF3223) 1413 1484 - -
Pte14g01239 1534 Gene3D - 885 930 - -
Pte14g01239 1534 Gene3D - 356 526 - -
Pte14g01239 1534 Gene3D RNA polymerase ii 393 445 - -
Pte14g01239 1534 PANTHER DNA-DIRECTED RNA POLYMERASE 62 1327 IPR045867 GO:0003899|GO:0006351
Pte14g01239 1534 FunFam DNA-directed RNA polymerase subunit 527 665 - -
Pte14g01239 1534 Pfam RNA polymerase Rpb1, domain 4 734 803 IPR007083 GO:0003677|GO:0003899|GO:0006351
Pte14g01239 1534 Gene3D RNA polymerase Rpb1, domain 3 527 673 IPR042102 -
Pte14g01239 1534 CDD RNAP_IV_RPD1_N 67 895 IPR040403 -
Pte14g01239 1534 Pfam RNA polymerase Rpb1, domain 5 847 1271 IPR007081 GO:0003677|GO:0003899|GO:0006351
Pte14g01239 1534 Gene3D - 1391 1486 - -
Pte14g01239 1534 Pfam RNA polymerase Rpb1, domain 2 360 517 IPR000722 GO:0003677|GO:0003899|GO:0006351
Pte14g01239 1534 Pfam RNA polymerase Rpb1, domain 3 523 671 IPR007066 GO:0003677|GO:0003899|GO:0006351
Pte14g01239 1534 SMART rpolaneu7 259 547 IPR006592 GO:0003677|GO:0003899|GO:0006351
Pte14g01239 1534 Pfam RNA polymerase Rpb1, domain 1 58 274 IPR007080 GO:0003677|GO:0003899|GO:0006351
Pte14g01239 1534 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 57 1330 - -
Pte14g01239 1534 Gene3D RNA polymerase II, clamp domain 49 157 IPR044893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01239 Pte-Chr14 33668402 33680409 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01239 K16250 - qsa:O6P43_024240 1887.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01239 14 33668402 33680409 Pte14g01239 14 33668402 33680409 RCT