Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01237 ATGGCCAAGAATGTTGGAATTCTCGCAATGGATATATACTTCCCTCCTACATGTGTCCAACAGGAAGCACTAGAGGCTCATGATTGTGCAAGTAAAGGGAAGTATACTATTGGCCTTGGACAAGACTGCATGGCGTTCTGCACAGAGGTGGAAGATGTCATCTCAATGAGTTTGACGGTGGTTTCTTCCCTCCTTGAGAAATACGGTATTGACCCTAAACAAGTTGGTCGGCTGGAAGTAGGCAGTGAGACTGTGATAGACAAGAGCAAATCCATCAAGACCTTCCTCATGCAGATATTTGAGAAATCTGGAAACACTGATCTCGAGGGTGTTGATTCAACAAATGCATGCTATGGAGGCACTGCAGCTTTGTTCAACTGTGTTAATTGGGTAGAAAGCAGTTCATGGGATGGACGATATGGACTGGTTGTCTGCACTGACAGTGCGGTTTATGCTGAAGGACCAGCTCGGCCCACTGGAGGAGCTGCTGCCATTGCTTTGCTTGTAGGTCCAGATGCTCCTATAGCTTTTGAGAGCAAGTTGAGAGCGAGTCATATGTGTCATGCCTATGATTTTTACAAGCCTAACCTTGCTAGTGAATATCCGGTTGTCGATGGGAAGCTCTCCCAAACATGTTATCTAATGGCACTTGATTCTTGCTATAAATTATTATCTCACAAGTATGAGAAACTTGAAAGCAAGCAATTTTCTATTTCTGATGCTGAATATTTTGTGTTTCATTCCCCATACAACAAGCTTGTACAGAAAAGTTTTGCCCGCTTGGTGTTCAATGACTTCTTGAGAAATGCCAGCTCTATTGATGAGGCTGCTAAGGAAAAGCTTGAGCCTTTCTTAACTTTATCAGGTGATGAAAGCTACCAGAACCGGGATCTTGAAAAGGTGAGCCAGCAAGTTGCCAAGTCCTTCTATGATGTGAAGGTACAACCATCAACGCTGATCCCTAAGCAAGTTGGCAACATGTACACTGCATCTCTTTATGCAGCATTTGCCTCTCTAATTCATAACAAGCACAGCACACTGGCTGGTAAACGCGTGGTGCTGTTCTCTTATGGCAGTGGCTTAACTTCCACTATGTTCTCTTTGCAACTCAATGATGGAAGACACCCCTTTACCTTGTCAAACATTGCTAAGAAGATGGGTATTGCAGATAAATTGAAGTCAAGACACGAGGTTACACCTGAGAAGTTTGTTGAAACTTTGAAGTTAATGGAACACAGGTATGGTGGCAAGGACTTCGTCACAAGCAAGGATTGCAGCCTCCTGGCCCCCGGTGTATACTATCTCACTGAAGTTGATTCCATGTACCGGAGATTCTATGACAAGAAAGCCGTAGTGGAAAATGGTGCAATCGCTAATGGCCACTGA 1386 0.4408 MAKNVGILAMDIYFPPTCVQQEALEAHDCASKGKYTIGLGQDCMAFCTEVEDVISMSLTVVSSLLEKYGIDPKQVGRLEVGSETVIDKSKSIKTFLMQIFEKSGNTDLEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIALLVGPDAPIAFESKLRASHMCHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKLLSHKYEKLESKQFSISDAEYFVFHSPYNKLVQKSFARLVFNDFLRNASSIDEAAKEKLEPFLTLSGDESYQNRDLEKVSQQVAKSFYDVKVQPSTLIPKQVGNMYTASLYAAFASLIHNKHSTLAGKRVVLFSYGSGLTSTMFSLQLNDGRHPFTLSNIAKKMGIADKLKSRHEVTPEKFVETLKLMEHRYGGKDFVTSKDCSLLAPGVYYLTEVDSMYRRFYDKKAVVENGAIANGH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01237 461 NCBIfam hydroxymethylglutaryl-CoA synthase 2 449 IPR010122 GO:0004421|GO:0008299
Pte14g01237 461 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 175 449 IPR013746 GO:0004421|GO:0006084|GO:0010142
Pte14g01237 461 FunFam 3-hydroxy-3-methylglutaryl coenzyme A synthase 1 450 - -
Pte14g01237 461 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 1 449 - -
Pte14g01237 461 SUPERFAMILY Thiolase-like 4 172 IPR016039 GO:0016746
Pte14g01237 461 CDD init_cond_enzymes 4 368 - -
Pte14g01237 461 SUPERFAMILY Thiolase-like 175 447 IPR016039 GO:0016746
Pte14g01237 461 Pfam Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 174 IPR013528 -
Pte14g01237 461 Gene3D - 1 451 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01237 Pte-Chr14 33650922 33654936 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01237 K01641 - gmx:100780554 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01237 14 33650922 33654936 Pte14g01237 14 33650922 33654936 RCT