LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte14g01225	ATGACGCAAACCCGGTTCTTTCCAACCCGGAATCCACAACCTGACGAAGATATCAAGTCCTCCAACTCGGGAAATACTCGTACAAGCAGTCGTGGCGGCGGAGGGACCGCCATGAGAGTTATTGTTCCCCTAAAAGGGGTTGTTCAAGGCAGAGGAGGCCTCTTTTTTGGCTCTGTTATTCCATGTGCTCTCTTCTACTTTCTTCAGCTCTACTTAAAGAGGCGCCATCGTTCTCGTCACCCTAACTCGCCTCCTTCTTCACCCACTCCGGGCTCTGGTAATTCGTCTTCGGAATCTTCCGCTCACGTTGCGGAGATTTCTGCCTTGTCTCGTTCTCCTTCTCGACTCCTTCTGTCCCCGAGGAGTACCGGTGGACCAGTTTACGTTTCGGCTCGGGCTAATTCAGTTGCTAAGATTACTACTGACTCTCCTTATTACGTGGGGTTGAAGAAGGCCGCAGAAGATCCATATGACAGGGTTCTTAATCCTAATGGGGTTATTCAGCTTGGTTTGTGTGAAAACAACATATCTATGGACTTGGTTCGGGAGTGGCTTGCTGAAAATGCAGAAGCTGCTGTTTCTGGCGGAAACTTTGGTATATCCGGTATTGCAGCTTACCAACCTCTCGATGGATTGATGGAATTGAAAGTGGCTGTGGCAGGTTTCATGTCTAAAGCAATGGGAAAGCCCGTTTCCTTTGATCCCTCGAATATGGTGTTAACCGCTGGTGCAACTCCTGCACTTGAGATGCTTAGCTTTTGCCTAGCCGACAATAGGAATGCATTTCTTGTTCCTACCCCTCATGGACCAGGCTTTGATGGGAATGTAAAATGGCGAACTGGGGTCGAAATAGTGCCTGTTCCCTGTCGCAGTACCGATAATTTCAGCTTAAGTATCCATGCTCTCGATCGAGCTTTTAACCAGACAAAGAAACGTGGTCAAAAGGTTCGAGGAATTATCATCACGAATCCCTCAAATCCTGTAGGCACTTTGCTAAATCGTGAAACTTTGTATAGCCTTGTGGACTTTGCCAGAGAGAAGAACATCCACATAGTATCAAATGAAATATTTCTAGGATCCACTTACGGAAACGAGAAGTTTGTCAGCATGGCAGAAATCATGGAATCAGAAAAACTTGATCGGGACAGGGTTCATATTGTATATGCTCTATCAAAAGATCTGTCTCTTTCAGGTTTTGGTGTCGGTGTCATCTACTCTTGCAATGACATTGTTCTGGCGGCTACCAAAAAATTAGCAAGGTTCTCATCCATTTCTGCTCCAACCCAGAGACTAGTTATCTCAATGCTTAGCGATTCAAAATTTGTGATTAAGTTCATGGAGCTCAGTAAATCGAGGCTTCAGAAAATGCATAGAATGTTTGTTGCGGGATTGAAGCAGCTATCGATTGAGTGCACCAAGAGCAGTGGAGGTTTCTACTGTTGGGCGGACATGAGTAGATTCATTCGCTCTTATAATGAGAAAGGGGAGCTGGAGCTCTGGGACAAGTTGTTGAATGTAGCTAAGATTAATGTCACCCCAGGATCTTCTTGTTACTGTATAGAACCTGGATGGTTCAGGTTTTGTTTTACTTCCTTGACTGAACAGAACATTCCAGTAGTTCTGGAACGGATTCAGAGAGTCACAGAAACCTCTAAATTCTAA	1662	0.4531	MTQTRFFPTRNPQPDEDIKSSNSGNTRTSSRGGGGTAMRVIVPLKGVVQGRGGLFFGSVIPCALFYFLQLYLKRRHRSRHPNSPPSSPTPGSGNSSSESSAHVAEISALSRSPSRLLLSPRSTGGPVYVSARANSVAKITTDSPYYVGLKKAAEDPYDRVLNPNGVIQLGLCENNISMDLVREWLAENAEAAVSGGNFGISGIAAYQPLDGLMELKVAVAGFMSKAMGKPVSFDPSNMVLTAGATPALEMLSFCLADNRNAFLVPTPHGPGFDGNVKWRTGVEIVPVPCRSTDNFSLSIHALDRAFNQTKKRGQKVRGIIITNPSNPVGTLLNRETLYSLVDFAREKNIHIVSNEIFLGSTYGNEKFVSMAEIMESEKLDRDRVHIVYALSKDLSLSGFGVGVIYSCNDIVLAATKKLARFSSISAPTQRLVISMLSDSKFVIKFMELSKSRLQKMHRMFVAGLKQLSIECTKSSGGFYCWADMSRFIRSYNEKGELELWDKLLNVAKINVTPGSSCYCIEPGWFRFCFTSLTEQNIPVVLERIQRVTETSKF*	554

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	259	280	-	-
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	169	195	-	-
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	383	407	-	-
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	415	438	-	-
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	200	216	-	-
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	313	337	-	-
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	237	257	-	-
	Pte14g01225	553	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	349	372	-	-
	Pte14g01225	553	Gene3D	Aspartate Aminotransferase, domain 1	155	543	IPR015422	GO:0003824
	Pte14g01225	553	MobiDBLite	consensus disorder prediction	89	104	-	-
	Pte14g01225	553	MobiDBLite	consensus disorder prediction	1	36	-	-
	Pte14g01225	553	MobiDBLite	consensus disorder prediction	1	33	-	-
	Pte14g01225	553	CDD	AAT_like	206	546	-	-
	Pte14g01225	553	Pfam	Aminotransferase class I and II	167	544	IPR004839	GO:0009058\|GO:0030170
	Pte14g01225	553	SUPERFAMILY	PLP-dependent transferases	143	547	IPR015424	-
	Pte14g01225	553	Gene3D	-	189	438	IPR015421	GO:0003824
	Pte14g01225	553	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	121	546	-	-
	Pte14g01225	553	MobiDBLite	consensus disorder prediction	77	104	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte14g01225	Pte-Chr14	33557613	33560831	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte14g01225	K14270		-	qsa:O6P43_024270	742.651

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte14g01225	14	33557613	33560831	Pte14g01225	14	33557613	33560831	RCT