Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01177 ATGCGTAGACAGGAATCGTATAAAGATATTACTATAGGAAGAGGTGGAGAATCCGAGACATCTAGGAATTCAGGGAAAGCTCGTTCAGGCGGTAGCGAGACTAGGCGCCTTCATCCACCCATTGAATCTTTCTGGCAACTCTCATCTGTAGAGAAATCTAAGAGCTTTTCTTCGATCTCCAACAATGCAGGAGTGAAATTAATGTTGTACCCGCTTAAGTTAAAGGATTCCATGAAGAAATTTGGAAGGTCTAAGAGCTTGCAATTAGTTCTAGAAGGAGAACATGATCCGAAGGACAAACAGCTTGTTGACACCTTTCGTGAACAGCTTTTCCTTGACGGCCAGTTACCCGGGAAGCACAATGATTACCATACTCTTATACGGTTTCTCCGGATGAGGGACTTCGATGTTCCAAAAGCTAAAGAAATGTTTCTGAATTATCTGAAGTGGCGTGAGGAATTTCGAGTTGATAAGATACCAAAGGAATTGAAGTTTGAAGAGTTGTCTGAAGTGAAAAAATGTTATCCACATGGATATCATGGAGTTGATAGATTCGGAAGGCCAGTGTATATTGAAAGGCTCGGAATGGTAGACATGAACACTTTGTTGCAAGTAACAAACACAGAAAGACTTGTCAAATACCATGTAGCAGAACAAGAGAAGACACTACACTTAAGATATCCTGCATGTTCGATTGCAGCTAAAAGGCACATTGCATCCACCACAAGCATAATAGATGTCAATGATGTGGGTATGTCAAATTTCTCAAAGCCTGCAAGATATCTCTTCATGGAGATACAGAAGATTGACAGCAATTACTACCCTGAGACCCTACACCAGCTCTTTATTATTAATGCAGGATCAGGATTTAGGATGTTGTGGAAGGTACTGAAGGCACTTCTAGATGCACGCACCGTAGCCAAAATTCGAGTCCTTGGCACTGACTACCTTAGCATCCTGCTTGAAGCTGTTGACAGAAGTAATCTGCCAAGTTTTCTGGGTGGAACCTGCAAGTGTTCTGACTACGGAGGTTGCCTACTGAGTGACAAAGGACCCTGGAACAATCCAGAAATTACAGAGTTGCTTCAGACAATTCATGATATAGAAGAGATACCTAATAATGGAGAAAATGGAGATGCTGGTTTTAACGATACAAGGGTGCATGGCGCGGATAATCAAGAAACCAAAAGTGAAGGGATGCTTGCCTTAAAAGATATTGTGGGGTTGGAAGCTGCACTTTGTGACACAAATGAAAAAATTAATACCCTAGAGGTTGCTCTTGAGGACGCAAAGGTGGTTTTGAAAGGACTTGCAAAGCGCATAGAAGATCTCAGAATGTCAACTGGCAAACATCCCATTTAA 1362 0.4178 MRRQESYKDITIGRGGESETSRNSGKARSGGSETRRLHPPIESFWQLSSVEKSKSFSSISNNAGVKLMLYPLKLKDSMKKFGRSKSLQLVLEGEHDPKDKQLVDTFREQLFLDGQLPGKHNDYHTLIRFLRMRDFDVPKAKEMFLNYLKWREEFRVDKIPKELKFEELSEVKKCYPHGYHGVDRFGRPVYIERLGMVDMNTLLQVTNTERLVKYHVAEQEKTLHLRYPACSIAAKRHIASTTSIIDVNDVGMSNFSKPARYLFMEIQKIDSNYYPETLHQLFIINAGSGFRMLWKVLKALLDARTVAKIRVLGTDYLSILLEAVDRSNLPSFLGGTCKCSDYGGCLLSDKGPWNNPEITELLQTIHDIEEIPNNGENGDAGFNDTRVHGADNQETKSEGMLALKDIVGLEAALCDTNEKINTLEVALEDAKVVLKGLAKRIEDLRMSTGKHPI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01177 453 Gene3D - 76 154 - -
Pte14g01177 453 SMART CRAL_TRIO_N_2 122 147 IPR011074 -
Pte14g01177 453 Gene3D - 155 365 IPR036865 -
Pte14g01177 453 CDD SEC14 165 336 IPR001251 -
Pte14g01177 453 Coils Coil 427 447 - -
Pte14g01177 453 SMART sec14_4 167 338 IPR001251 -
Pte14g01177 453 SUPERFAMILY CRAL/TRIO N-terminal domain 92 161 IPR036273 -
Pte14g01177 453 SUPERFAMILY CRAL/TRIO domain 166 361 IPR036865 -
Pte14g01177 453 PRINTS Cellular retinaldehyde-binding protein signature 294 313 - -
Pte14g01177 453 PRINTS Cellular retinaldehyde-binding protein signature 327 336 - -
Pte14g01177 453 PRINTS Cellular retinaldehyde-binding protein signature 125 147 - -
Pte14g01177 453 Pfam CRAL/TRIO domain 175 335 IPR001251 -
Pte14g01177 453 MobiDBLite consensus disorder prediction 1 38 - -
Pte14g01177 453 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 63 364 - -
Pte14g01177 453 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 167 341 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01177 Pte-Chr14 33125829 33129179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01177 120 332 Acyl Lipid Metabolism Gene Families AT1G55840 29.032 8.31e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01177 K26544 - tcc:18606270 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01177 14 33125829 33129179 Pte14g01177 14 33125829 33129179 RCT