Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01012 ATGGCTTTGACACTTCGTTCTTCAACTTCTTTTATCAATCAAATAGACAACAAAGGCCTCAAGAATCTCGACCAGGATCAGGCTAGTCCAGCCATAGTTTCCATGCCAACAACGAACGCATCATCATTTCGCGTCAGAGCTAGTATCTCAATGCAATACCAAACATCTTCTCGCAAGAAAATTACACCCTTTGAGGTAATCAATAGAAACGATGATTTGGAGAAGGTTCATGCACCATTTGGTGTTCGCGAAAATAATGGCTCCAAAGTCCCTGTATTTGTGATGATGCCTTTGGATACGATAACACCTGCAGGTAACTTGAATAAGCCAAGAGCTGTCAACGCCAGTTTGATGGCCTTGAAGAGTGCCGGAGTGGAGGGGGTCATGATGGATGTTTGGTGGGGTTTGGTTGAGAGAGATGGACCTACGATGTACAATTGGGATGCTTATGCCGAGGTTGTGGAAATGGTGAAAAATCATGGCCTGAAACTCCAAGCTGTCATGTCTTTTCATCAGTGTGGAGGAAACGTTGGAGACTCGTGCTTGTAA 549 0.4444 MALTLRSSTSFINQIDNKGLKNLDQDQASPAIVSMPTTNASSFRVRASISMQYQTSSRKKITPFEVINRNDDLEKVHAPFGVRENNGSKVPVFVMMPLDTITPAGNLNKPRAVNASLMALKSAGVEGVMMDVWWGLVERDGPTMYNWDAYAEVVEMVKNHGLKLQAVMSFHQCGGNVGDSCL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01012 182 ProSitePatterns Beta-amylase active site 1. 171 179 IPR018238 GO:0000272|GO:0016161
Pte14g01012 182 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 145 163 IPR001554 GO:0000272|GO:0016161
Pte14g01012 182 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 124 138 IPR001554 GO:0000272|GO:0016161
Pte14g01012 182 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 167 182 IPR001554 GO:0000272|GO:0016161
Pte14g01012 182 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 46 181 IPR001554 GO:0000272|GO:0016161
Pte14g01012 182 Pfam Glycosyl hydrolase family 14 93 181 IPR001554 GO:0000272|GO:0016161
Pte14g01012 182 Gene3D Glycosidases 82 182 - -
Pte14g01012 182 SUPERFAMILY (Trans)glycosidases 89 181 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01012 Pte-Chr14 31763669 31764217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01012 1 181 Glycoside Hydrolase AT4G17090 52.459 3.39e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01012 K01177 - dcr:108209963 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01012 14 31763669 31764217 Pte14g01012 14 31763669 31764217 RCT