Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00924 ATGGCAGCGAATGACCGAATTCTCAAACCATCTAAGTGGTTATCTCAAATAGGTCGGTTAAAGCGTAACCTTGATATCTGGAGACCAAAGTCAATGACGTTTGTCAATGTTGGTTCAACAGTAACATCAAGGGCTTCTCCTACCTCTCCCACATCACCTAACAATGACAGGAGTGTTGGTAAAGAAGAAAAGCAGATCAAGGAAGTTTTCCGTCGCTTTGATGGAGATGGAGATGGGAAAATCTCTGCCTATGAACTGAGGGGTTATTTAGGCTCTATTGGAGAGTATATCTCTCATGAAGATGCTCAACAAGTGATCAGTGCTCTTGATTCAGATGGCGATAACTTGTTGGACTTCCAAGATTTCTCGAGGCTCATGAAGAGGGAATCCGTAGGTGGGGCTGATCACGACGAGGATCTGAGGAAGGCTTTTGAGATGTTCGAGTTGGAGAGAGGGTCGGGATGGATAACCCCAAAGGGTTTACAGGTGATGTTGCAGCGTCTTGGAGACACAAAAACACATGATGAGTGCGTTGCCATGATTCAGTTCTATGATATAGATGGCAATGGAGTCCTTGACTTCAGTGAATTTCAGAAGATGATGGCATGA 609 0.445 MAANDRILKPSKWLSQIGRLKRNLDIWRPKSMTFVNVGSTVTSRASPTSPTSPNNDRSVGKEEKQIKEVFRRFDGDGDGKISAYELRGYLGSIGEYISHEDAQQVISALDSDGDNLLDFQDFSRLMKRESVGGADHDEDLRKAFEMFELERGSGWITPKGLQVMLQRLGDTKTHDECVAMIQFYDIDGNGVLDFSEFQKMMA* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00924 202 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
Pte14g00924 202 SMART efh_1 176 202 IPR002048 GO:0005509
Pte14g00924 202 SMART efh_1 101 129 IPR002048 GO:0005509
Pte14g00924 202 SMART efh_1 65 93 IPR002048 GO:0005509
Pte14g00924 202 CDD EFh 139 202 IPR002048 GO:0005509
Pte14g00924 202 Pfam EF hand 177 202 IPR002048 GO:0005509
Pte14g00924 202 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 64 127 - -
Pte14g00924 202 ProSitePatterns EF-hand calcium-binding domain. 185 197 IPR018247 -
Pte14g00924 202 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Pte14g00924 202 ProSiteProfiles EF-hand calcium-binding domain profile. 172 202 IPR002048 GO:0005509
Pte14g00924 202 MobiDBLite consensus disorder prediction 38 56 - -
Pte14g00924 202 ProSitePatterns EF-hand calcium-binding domain. 110 122 IPR018247 -
Pte14g00924 202 Pfam EF-hand domain pair 63 127 IPR002048 GO:0005509
Pte14g00924 202 Gene3D - 43 132 - -
Pte14g00924 202 Gene3D - 133 202 - -
Pte14g00924 202 SUPERFAMILY EF-hand 61 201 IPR011992 -
Pte14g00924 202 FunFam Calmodulin-2 A 56 202 - -
Pte14g00924 202 ProSiteProfiles EF-hand calcium-binding domain profile. 97 132 IPR002048 GO:0005509
Pte14g00924 202 MobiDBLite consensus disorder prediction 38 63 - -
Pte14g00924 202 CDD EFh 65 127 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00924 Pte-Chr14 30958607 30959605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00924 9 202 EF-hand Containing Proteins AT3G50770 50.990 1.10e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00924 K13448 - jre:108995329 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00924 14 30958607 30959605 Pte14g00924 14 30958607 30959605 RCT