Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00884 ATGTGGTCCTATAGGTCCTCACTGCAATGTCTGGTTCTGCTTCTTGGAGTTGCAGGCATGTTTTTTGGAGCAGAATCAAAGACTTTCTGGAGAGACATAGAGGTATTGAAGGAAGTGAAGAAAGGGATTGACATGAGTTCAGTGACTCCAGGCTCATGTGTGAGCTCCTGGGACTTCGGCGTAGACCCATGTGACAATCTCTTCGGTGAGATATTCACTTGTGGATTCAGGTGTGACCTTGTTGTTTCTGGGTTGAACAGAGTCACAGAACTCACTCTAGACCAAGCTGGCTACAAAGGCTCCCTCTCTTCCTCTTCTTGGAACCTCCCTTACTTGGAAACCCTCGACTTCTCCAACAATTTCTTTTTTGGTGCGATTCCTGAGTCGTTATCAAACCTCACACGACTGCGCCGGTTGAGTTTGTCAAGGAACTCGTTCGCCGGTGAGATACCCACTTCGATTGGCTATCTCACTGTCCTTGAAGAACTCTACCTTGACAACAACAACCTCCAAGGAACAATTCCAGCAAGTTTCAATGGTCTACTCAGCTTGCAAAGACTTGAACTTCAATCGAACAAGCTCACAGGTCCGCTTCCCGATTTGGGTTCTCTTAAAAATCTGTATTTCTTCGAGGCCAGCGACAATGGCATCACCGGAGAAATCCCTGCTGCATTGCCGGTTTCTTTGATACAATTAACAATGAGAAACAACAGCTTATCTGATGCGATGAACCCTGAGAGTTTCAGAAATTTGGCGTATTTACAAGTCATTGATTTGAGCTACAATAATCTCAACGGCTCTGTTCCGTCTGTTCTATTCGAGCTACCATCTCTGCAGCAACTGACACTCTCCTTCAATCATTTGTCCTCCATAGAAACCCCTTCTACAGCAATGAGTGAAGTCATAGCCATTGATCTAAGCAACAACGAGCTACGAGGATTTCTGCCATCGTTTATGGCACTCATGCCAAAGCTGTCAGCTTTATCCTTAGAGCACAACAAGTTCAGTGGCATGATACCGGTCCAATACGCATTGAAGACCGTTTTTCCTGACACTGGAATTGAACCATTTGAGAGATTGTTGTTGACTGGGAATTACTTGTTTGGACCCATACCAGGTCCCCTCACTACACTCCAACCTGGTTCTGCAAACGTTAATCTTGTCGATAACTGCTTGTACAGATGCCCCGCGGTTTTCTTTTTCTGTCAAGGTGGAGACCAAAAATCTATGACAGAATGCAAGAGCTTTGGCCCCATCATCCCTTGA 1266 0.455 MWSYRSSLQCLVLLLGVAGMFFGAESKTFWRDIEVLKEVKKGIDMSSVTPGSCVSSWDFGVDPCDNLFGEIFTCGFRCDLVVSGLNRVTELTLDQAGYKGSLSSSSWNLPYLETLDFSNNFFFGAIPESLSNLTRLRRLSLSRNSFAGEIPTSIGYLTVLEELYLDNNNLQGTIPASFNGLLSLQRLELQSNKLTGPLPDLGSLKNLYFFEASDNGITGEIPAALPVSLIQLTMRNNSLSDAMNPESFRNLAYLQVIDLSYNNLNGSVPSVLFELPSLQQLTLSFNHLSSIETPSTAMSEVIAIDLSNNELRGFLPSFMALMPKLSALSLEHNKFSGMIPVQYALKTVFPDTGIEPFERLLLTGNYLFGPIPGPLTTLQPGSANVNLVDNCLYRCPAVFFFCQGGDQKSMTECKSFGPIIP* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00884 421 FunFam Nuclear pore complex protein NUP107 30 200 - -
Pte14g00884 421 Gene3D Ribonuclease Inhibitor 297 390 IPR032675 -
Pte14g00884 421 SMART LRR_typ_2 133 155 IPR003591 -
Pte14g00884 421 SMART LRR_typ_2 181 204 IPR003591 -
Pte14g00884 421 SMART LRR_typ_2 157 180 IPR003591 -
Pte14g00884 421 SMART LRR_typ_2 275 299 IPR003591 -
Pte14g00884 421 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515
Pte14g00884 421 SUPERFAMILY L domain-like 82 346 - -
Pte14g00884 421 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515
Pte14g00884 421 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 12 414 - -
Pte14g00884 421 Gene3D Ribonuclease Inhibitor 198 296 IPR032675 -
Pte14g00884 421 Pfam Leucine rich repeat 232 288 IPR001611 GO:0005515
Pte14g00884 421 Pfam Leucine rich repeat 160 215 IPR001611 GO:0005515
Pte14g00884 421 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Pte14g00884 421 FunFam Leucine-rich repeat receptor protein kinase EMS1 244 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00884 Pte-Chr14 30541144 30543485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00884 82 404 Receptor kinase-like Gene Family AT1G17750 29.132 5.32e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00884 - - pop:7495521 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00884 14 30541144 30543485 Pte14g00884 14 30541144 30543485 RCT