Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00846 ATGGTACTCGAGGCAACCATGATCTGTATCGACAATTCTGAATGGATGCGCAATGGGGATTACTCTCCTTCAAGATTTCAAGCTCAAGCAGATTCCATTAACCTTATTTGCGGAGCAAAAACACAGTCAAATCCAGAAAACACTGTGGGAGTACTTACAATGTCAGGTAAAGGAGTTCGTGTTTTGGTCACGCCTACAAGTGATCTTGGCAAGATCTTAGCTTGTATGCATGGACTAGAAATTGGTGGTGAGATGAGCTTAGCTGCTGGCATTCAAGTGGCACAGCTAGCTCTTAAGCATCGGCAAAATAAGAAGCAGCAACAGAGAATTATTGTCTTTGCTGGAAGCCCTGTCAAGCATGAAAAGAAGCTGTTGGAAATGATTGGAAGGAAGCTAAAGAAGAATAGTGTGGCGCTTGATATAGTTAACTTTGGTGAAGAAGATGAAGGGAAGACTGAGAAATTGGAAGCACTTCTTTCTGCTGTAAACAACAATGATACTAGCCACATTGTTCATATACCTCCTGGTCCCAATGCCCTTTCTGATGTTCTTATAAGTACACCCATTTTCACTGGTGACGGGGAAGGTGGAAGTGGCTTTGCTGCAGCAGCAGCAGCGGCTGGCGGAGTCTCTGGCTTTGACTTTGGTGTGGATCCGAACTTAGATCCTGAACTTGCTCTGGCTCTGAGAGTTTCCATGGAGGAGGAGAGGGCCAGACAAGAAGCAGCTGCAAAGAAGGCTTCTGAGGAAACTTCTAAAGAGGAAAAGAAAGATGAAATATCTGGTTTGCGGGATACTGCAATGACTGAAAGTGCTAGCGTTGGGAATTCTGAACCTGAAATCAAGACAAATGATATGACAGATGATGAAAATGCTTTACTTCAGCAGGCCCTTGCTATGTCCATGGATGATCCTGACACTAGCCACAATATGCGAGATACAGTTATGTCAGAAGCAGATGCCAATGATCCAGAATTGGCACTTGCTCTCCAGTTGTCAGCGCAAGATAGTACAAATGGTTCGTCCAGTCAGTCAGACATGAGTAAATTGTTGGCTGATCAGAATTTTGTATCCTCAATCCTGGCAACTCTTCCAGGTGTTGATCCAAATGATCCAACAGTGAGAGAATTGCTCGCCTCCATGCAAAGCCAACCTGAGGTGAGTTTGCCAAGTTACTTATATGACCATAAATCAACAAATAAAAGATGCATATTTGGTATGCCCCCTTGTTACATTCTAACGTTGCCTTCTGTTGATCAAATTGGATTCCTTTTTTTTTTTTTCCCATTGTCATGTAAGCATTGGAAGTATATTGTATGTCATTATGCGACAGTGGGATTATTGCCTGGTGCTGACATGCTAACATTCGCCTGTAGCACTATAATAAAATTGTGTTAA 1398 0.4285 MVLEATMICIDNSEWMRNGDYSPSRFQAQADSINLICGAKTQSNPENTVGVLTMSGKGVRVLVTPTSDLGKILACMHGLEIGGEMSLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKHEKKLLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLSAVNNNDTSHIVHIPPGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERARQEAAAKKASEETSKEEKKDEISGLRDTAMTESASVGNSEPEIKTNDMTDDENALLQQALAMSMDDPDTSHNMRDTVMSEADANDPELALALQLSAQDSTNGSSSQSDMSKLLADQNFVSSILATLPGVDPNDPTVRELLASMQSQPEVSLPSYLYDHKSTNKRCIFGMPPCYILTLPSVDQIGFLFFFFPLSCKHWKYIVCHYATVGLLPGADMLTFACSTIIKLC* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00846 465 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 384 IPR027040 GO:0006511|GO:0008540
Pte14g00846 465 FunFam 26S proteasome non-ATPase regulatory subunit 4 3 186 - -
Pte14g00846 465 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Pte14g00846 465 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Pte14g00846 465 Gene3D - 218 305 - -
Pte14g00846 465 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 220 239 IPR003903 -
Pte14g00846 465 SMART VWA_4 2 175 IPR002035 -
Pte14g00846 465 Coils Coil 230 259 - -
Pte14g00846 465 MobiDBLite consensus disorder prediction 239 264 - -
Pte14g00846 465 Pfam Ubiquitin interaction motif 323 336 IPR003903 -
Pte14g00846 465 Pfam Ubiquitin interaction motif 289 304 IPR003903 -
Pte14g00846 465 Pfam Ubiquitin interaction motif 222 235 IPR003903 -
Pte14g00846 465 FunFam 26S proteasome regulatory subunit N10 218 303 - -
Pte14g00846 465 CDD PSMD4_RAZUL 342 386 - -
Pte14g00846 465 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Pte14g00846 465 MobiDBLite consensus disorder prediction 266 281 - -
Pte14g00846 465 SUPERFAMILY vWA-like 4 175 IPR036465 -
Pte14g00846 465 CDD VWA_26S_proteasome_subunit 1 188 - -
Pte14g00846 465 MobiDBLite consensus disorder prediction 239 287 - -
Pte14g00846 465 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 289 308 IPR003903 -
Pte14g00846 465 SMART uim 321 340 IPR003903 -
Pte14g00846 465 SMART uim 289 308 IPR003903 -
Pte14g00846 465 SMART uim 220 239 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00846 Pte-Chr14 29899770 29906382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00846 K03029 - qsa:O6P43_033599 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00846 14 29899770 29906382 Pte14g00846 14 29899770 29906382 RCT