Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00843 ATGAGTGCTTCGAGGTTCATAAAGTGTGTCACCGTTGGGGATGGAGCTGTGGGAAAAACTTGTCTGCTTATTTCGTATACTAGCAACACCTTTCCCACTGATTACGTGCCTACTGTTTTCGACAATTTCAGTGCAAATGTAGTTGTCAATGGTGCCACCGTTAACCTTGGACTGTGGGATACAGCTGGACAAGAAGATTACAACAGATTAAGACCTTTAAGTTACCGTGGGGCTGATGTGTTCATATTGGCATTCTCTCTGATAAGCAGGGCCAGTTATGAAAATGTTTCCAAGAAGTGGATTCCAGAGTTGAAACACTATGCACCTGGTGTTCCAATTGTTCTTGTCGGCACAAAGCTTGACCTTCGGGATGATCAGCAGTTCTTTGTAGACCATCCTAGTGCTGTGCCTATTACAACGGCTCAGGGAGAGGAGCTGAGGAAGCTCATCAATGCCCCTGCCTACATTGAATGCAGCTCAAAGACACAGGAGAATGTGAAGGCAGTCTTTGATGCAGCCATTCGAGTTGTCCTTCAACCGCCTAAGCAGAAGAAAAAGAAGAGTAAAGCACAAAAGGCCTGCTCCATATTGTGA 594 0.4545 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISRASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDQQFFVDHPSAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00843 197 NCBIfam small GTP-binding protein domain 7 171 IPR005225 GO:0005525
Pte14g00843 197 ProSiteProfiles small GTPase Ras family profile. 2 197 IPR001806 GO:0003924|GO:0005525
Pte14g00843 197 PANTHER RHO FAMILY GTPASE 4 195 IPR003578 GO:0005525|GO:0007264
Pte14g00843 197 SMART rab_sub_5 7 180 - -
Pte14g00843 197 FunFam rac-like GTP-binding protein RHO1 5 192 - -
Pte14g00843 197 ProSiteProfiles small GTPase Rab1 family profile. 2 197 - -
Pte14g00843 197 SMART rho_sub_3 9 180 IPR001806 GO:0003924|GO:0005525
Pte14g00843 197 Gene3D - 5 192 IPR027417 -
Pte14g00843 197 Pfam Ras family 8 178 IPR001806 GO:0003924|GO:0005525
Pte14g00843 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 178 IPR027417 -
Pte14g00843 197 SMART ras_sub_4 4 180 - -
Pte14g00843 197 ProSiteProfiles small GTPase Rho family profile. 1 177 - -
Pte14g00843 197 SMART ran_sub_2 12 190 - -
Pte14g00843 197 CDD Rop_like 6 178 - -
Pte14g00843 197 PRINTS Transforming protein P21 ras signature 30 46 - -
Pte14g00843 197 PRINTS Transforming protein P21 ras signature 47 69 - -
Pte14g00843 197 PRINTS Transforming protein P21 ras signature 155 177 - -
Pte14g00843 197 PRINTS Transforming protein P21 ras signature 109 122 - -
Pte14g00843 197 PRINTS Transforming protein P21 ras signature 7 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00843 Pte-Chr14 29866636 29869362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00843 7 180 EF-hand Containing Proteins AT5G27540 25.287 3.90e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00843 K04392 - twl:119996966 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00843 14 29866636 29869362 Pte14g00843 14 29866636 29869362 RCT