Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00816 ATGCAGGCTGAGTTTGCCTTGCAGAGAGATCGGCAGACCATGGGTCGTAGATATGTGGAAGTCTTTAGGTGCAAGAGGCAGGATTATTACAATGCCGTTGCTGCTGAGGTAAACTATGAAGGGATTTATGACAATGACTACCATGGAAGTCCTCCTCCTTCTCGTTCCAAGAGATTCACTGACAAAGATCAACTGGAATACACAGAGATTCTGAAGATGCGCGGCCTACCATTCTCTGTGAAGAAATCTGAAATAATTGATTTTTTCAAAGATTTTAAGCTGATTGAAGACTCTGTGCATATTGCTTGTCGCCCTGATGGTAAAGCTACTGGAGAGGCATATGTGGAATTTATTTCTCCAGAGGAGGCTAAACAAGCGATGTCCAAGGATAAAATGTCAATTGGATCAAGGTATGTGGAGCTGTTTCCATCTACCCCAGATGAAGCTAGACGTGCAGAGTCGAGATCAAGACAGTGA 477 0.4361 MQAEFALQRDRQTMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPSRSKRFTDKDQLEYTEILKMRGLPFSVKKSEIIDFFKDFKLIEDSVHIACRPDGKATGEAYVEFISPEEAKQAMSKDKMSIGSRYVELFPSTPDEARRAESRSRQ* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00816 158 Gene3D - 1 39 IPR012677 -
Pte14g00816 158 Gene3D - 53 158 IPR012677 -
Pte14g00816 158 CDD RRM_hnRNPH_ESRPs_RBM12_like 70 142 - -
Pte14g00816 158 SUPERFAMILY RNA-binding domain, RBD 68 155 IPR035979 GO:0003676
Pte14g00816 158 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 139 IPR000504 GO:0003723
Pte14g00816 158 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 146 IPR000504 GO:0003723
Pte14g00816 158 SMART rrm1_1 70 142 IPR000504 GO:0003723
Pte14g00816 158 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00816 Pte-Chr14 29683046 29683522 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00816 K12898 - cave:132171973 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00816 14 29683046 29683522 Pte14g00816 14 29683046 29683522 RCT