Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00687 ATGGATTCCTCGTTGACATCTTGTGATGGACAGCAAAATAGTTCTTGTGTTGAAGCTTTAGTTCCTCCTCGTGTCTATGAGGCAAGTGAATCTTCATCAAGTTCAGTTTGCAAAACCCCAGAAGAATCAGAACTGGTTCGTTCATTGGAAAACCAAGCTGAATCCCTACCTGATCAGACTCCTGGTGCGGAAACCCTAGGAGGGTTTTCGGCATCTAATCAGACTCTGTCGTCTTCGATGTCTCAGACTCCAACTTCAGGTGGATGCTCTTCTCCAGTTAGAATTGAAGCCCAGGCTCGAGATTTGGCTAATTCTGGTGATTTGGAGGAACAAATTGCATGCCATGATTCAGAGCCATCTTCCCCACTTCGATGCTCCAACTGTGGCCACTGTTCTGATACTCGTGAGCCTCTGATTGACCAGAGCTTGGAGATTGAAAATGTGGATACCCTCTCAAGTGCTTTAGAATCTTTCACAAAGGTTGAAAACATTGATGGAAAGTTTCAATGCGAGAACTGCAAGGAGGAAATATCAATGGAGAAGCAGTTTATGCTGAATAAGGCACCTTCAGTTGCCGCATTTCAGTTGAAAAGATTCAAGACTCTGGAGTCATATATTGAGAAGGTGGATAAGCATGTTGAATTTCCATTGCAGTTGGACTTGGAGCCCTATACTATGGATTGTCAGAATAATGCAACCTTGAAATATGACCTCTATGCAATTGTGGTACACGTCGGATATTCATCTTCCTCTGGCCATTACTTTTCTTTTGTACGCACCTCCCCTGATACATGGCACAGGCTGGATGATTCAATGGTCACTAGGGTTGGAGATGATTCCGTGTTATCTCAGAATGCTTATATGCTATTTTATACCAAGCGTGGTACACCTTGGTTTGAAAGTAGCATGGAAGTTCAAATGCCATGTCAGAATCCAAGTATTTTGAGTACCTCACCAACATCAGTTTTTGACTATGTTGACGCTGGCTCAGATTCTGTTGATGCACGTGTTAAGAGTTCTGATGCTAGTGAACCAACTGAGTCTGACGAGTATTGCGGGAAGCTGGGAGAATCTAGCTTTAATAACAGTCTGAATACTACTCAAAACCTTTCAGGACAGGGTGCTTCTAAAACACTGCAGTGGAATGCTGCCCCTGCAAATGAAGACCATCAAGAGATTGGCGATACAGGAGAGAATGATACTTGCCGTCCTTTAACTCCACCCAGGTCCCCTAGTCCAGATTTATGTTCTCCAGGGACTACTAATCATTCCATACCTCATAAGCACCTGAAGTTGGAGAATGGACGCAGTTGTGATAGATCATCAAACAAAATTGTTGAAAAGTCTTGGTCAGGGACTACTAATTATTCCATACCTCGCAAGCACCTGAAGTTGGAGAATGGACGCAGTTGTGATAGTTCATCTAACAAAATTGTTGAAAATTTTGAGAGAAAGGAAGCTTTTAGATACCTTAACCAGAGTAGAGTGCCTTGTTCAAAGCGCAAGCAGAAACTAATGGAAGCAATGCCTTCACAACACCAACTAGATGGCTCTGCAAACAAGAGACGTAAGAGAGTCAATTCTCCACAGTTGAAGTCCAACATTATGCCTCCTCGCCTAAGATCACACAATGAATCTGTCGTGCATCCTGTAGCTGCTGCAAGTGTACGCTGA 1674 0.4331 MDSSLTSCDGQQNSSCVEALVPPRVYEASESSSSSVCKTPEESELVRSLENQAESLPDQTPGAETLGGFSASNQTLSSSMSQTPTSGGCSSPVRIEAQARDLANSGDLEEQIACHDSEPSSPLRCSNCGHCSDTREPLIDQSLEIENVDTLSSALESFTKVENIDGKFQCENCKEEISMEKQFMLNKAPSVAAFQLKRFKTLESYIEKVDKHVEFPLQLDLEPYTMDCQNNATLKYDLYAIVVHVGYSSSSGHYFSFVRTSPDTWHRLDDSMVTRVGDDSVLSQNAYMLFYTKRGTPWFESSMEVQMPCQNPSILSTSPTSVFDYVDAGSDSVDARVKSSDASEPTESDEYCGKLGESSFNNSLNTTQNLSGQGASKTLQWNAAPANEDHQEIGDTGENDTCRPLTPPRSPSPDLCSPGTTNHSIPHKHLKLENGRSCDRSSNKIVEKSWSGTTNYSIPRKHLKLENGRSCDSSSNKIVENFERKEAFRYLNQSRVPCSKRKQKLMEAMPSQHQLDGSANKRRKRVNSPQLKSNIMPPRLRSHNESVVHPVAAASVR* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00687 557 MobiDBLite consensus disorder prediction 26 92 - -
Pte14g00687 557 SUPERFAMILY Cysteine proteinases 121 293 IPR038765 -
Pte14g00687 557 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 236 254 IPR018200 GO:0004843|GO:0006511
Pte14g00687 557 MobiDBLite consensus disorder prediction 506 539 - -
Pte14g00687 557 Pfam Ubiquitin carboxyl-terminal hydrolase 167 291 IPR001394 GO:0004843|GO:0016579
Pte14g00687 557 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 121 294 - -
Pte14g00687 557 MobiDBLite consensus disorder prediction 49 92 - -
Pte14g00687 557 Gene3D Cysteine proteinases 44 296 - -
Pte14g00687 557 MobiDBLite consensus disorder prediction 355 373 - -
Pte14g00687 557 MobiDBLite consensus disorder prediction 337 351 - -
Pte14g00687 557 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1 294 IPR028889 -
Pte14g00687 557 MobiDBLite consensus disorder prediction 27 41 - -
Pte14g00687 557 MobiDBLite consensus disorder prediction 387 429 - -
Pte14g00687 557 MobiDBLite consensus disorder prediction 336 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00687 Pte-Chr14 27924469 27928123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00687 121 293 Miscellaneous Gene Families AT2G24640 33.708 1.98e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00687 K11855 - cave:132176464 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00687 14 27924469 27928123 Pte14g00687 14 27924469 27928123 RCT