Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00488 ATGGCTATGCTCCTTCTGTTTTTGTTTCTAGCGGTAGCTTCTGTTTCTGCTGATGGAGATGCCTTCATTGGGGTTAACATTGGTACAGATGTCTCTGACATGCCAAGTCCAACACAGGTTGTTGCTCTTCTCAAAGCTCAAAGAATTCAGCATGTCAGACTCTATGATGCTGATCGAGCCATGCTCGTTGCACTTGCAAATTCAGGCATTCATGTAACTGTTTCTATTCCTAATGATCAGCTCCTCGGCATTGGTCAATCCAATGCTACTGCGGCCAACTGGATCACTCGCAATGTCTTGGCTCATGTCCCTGCTACCAACATCACAGCAATAGCTGTTGGATCTGAAGTCTTAACTGGCCTCCCAAATGCAGCTCCAATTCTAGTTTCTGCTCTAAAGTTCATTCACTCTGCTCTCGTCGCAGCTAATCTCGATAGACAAATCAAAGTCTCTACCCCACATTCTTCTTCGATCATCCTGGACTCTTTCCCTCCTTCGCAGGCCTTCTTTAACCGCACATGGAACCCTGTCTTGGTTCCATTGCTTAAATTTTTGCAGTCTACTGGTTCTTACCTAATGCTCAATGTATATCCATATTATGACTACCTGGAATCTAATGGCGTGATACCACTTGACTATGCATTGTTTCGACCCCTTCCACCGAACAAAGAAGCTGTTGATTTCGATACCCTCCTGCATTACACTAATGTCTTTGATGCCGTTGTTGATGCAGCATATTTTGCAATGTCTTATTTGAACTTCACCAACATCCCAATTGTAGTAACTGAATCAGGATGGCCCTCCAAGGGTGATTCTTCCAAGCAGGATGCTACCCTTGATAATGCTAACACTTATAACAGTAACTTGATAAAGCACGTGCTCAACAATACAGGCACTCCTAAACATCCTGGAGTTGCAGTTAATACTTTCATATATGAGCTCTACAACGAGGATTTAAGATCTGGTCCAGTATCTGAACAGAACTGGGGACTCTTTTACGCTAATGGGGCACCGGTTTACATCTTACATTTGACTGGTGCTGGTAGTGTTTTGGCAAATGATACCACAAATCAAACCTTCTGTGTTGCAAGAAGTAATGCTGAACCCAAGATGTTACAAGCAGCGCTAGACTGGGCTTGTGGACCAGGCAAAGTCGATTGTTCACCTCTGACGGAGGACCAACCTTGTTATGAACCAAATAATGTTGTTCAACATGCAACCTATGCATTCAATGCCTACTATCAGAAAATGGCAAAATCTCCTGGTACCTGTGATTTTAACGGGGTTGCTACTGTGACAACCACAGACCCAAGTACGGTTCCCAGTATTATTAGTTTTGTTGCATCAGAATAG 1353 0.4353 MAMLLLFLFLAVASVSADGDAFIGVNIGTDVSDMPSPTQVVALLKAQRIQHVRLYDADRAMLVALANSGIHVTVSIPNDQLLGIGQSNATAANWITRNVLAHVPATNITAIAVGSEVLTGLPNAAPILVSALKFIHSALVAANLDRQIKVSTPHSSSIILDSFPPSQAFFNRTWNPVLVPLLKFLQSTGSYLMLNVYPYYDYLESNGVIPLDYALFRPLPPNKEAVDFDTLLHYTNVFDAVVDAAYFAMSYLNFTNIPIVVTESGWPSKGDSSKQDATLDNANTYNSNLIKHVLNNTGTPKHPGVAVNTFIYELYNEDLRSGPVSEQNWGLFYANGAPVYILHLTGAGSVLANDTTNQTFCVARSNAEPKMLQAALDWACGPGKVDCSPLTEDQPCYEPNNVVQHATYAFNAYYQKMAKSPGTCDFNGVATVTTTDPSTVPSIISFVASE* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00488 450 Gene3D - 353 448 - -
Pte14g00488 450 Gene3D Glycosidases 22 348 - -
Pte14g00488 450 SMART X8_cls 359 441 IPR012946 -
Pte14g00488 450 FunFam Glucan endo-1,3-beta-glucosidase 4 354 447 - -
Pte14g00488 450 FunFam Glucan endo-1,3-beta-glucosidase 3 22 347 - -
Pte14g00488 450 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Pte14g00488 450 Pfam X8 domain 360 431 IPR012946 -
Pte14g00488 450 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 433 IPR044965 GO:0004553|GO:0005975
Pte14g00488 450 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Pte14g00488 450 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00488 Pte-Chr14 23601124 23604502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00488 20 438 Glycoside Hydrolase AT2G01630 78.043 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00488 K19891 - qsu:111993341 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00488 14 23601124 23604502 Pte14g00488 14 23601124 23604502 RCT