LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte14g00234	ATGAATCCCTTCTCGTCCGGAACGCGTTTGAGGGACATGATTCGGGCTATACGTGCATGCAAGACTGCAGCTGAGGAACGTGCCGTTGTAAGAAAAGAATGTGCTGCCATACGTTCTGCAATTAATGAAAATGATCAAGATTATCGACATCGTAACTTGGCAAAGATGATGTTCATCCACATGCTTGGTTATTCCACACATTTTGGTCAAATGGAGTGCCTAAAGTTGATTGCATCCCCTGGATTTCCAGAGAAAAGAATAGGTTACCTGGGCCTGATGTTGCTTCTTGATGAGAGACAAGAAGTTCTAATGTTGGTCACAAATTCGTTAAAACAAGATCTTAATCACTCAAACCAGTATATAGTTGGACTTGCTCTTTGTGCCTTAGGTAATATTTGTTCAGCAGAAATGGCCCGTGATCTAGCACCAGAAGTCGAAAGATTACTGCAATTTCGTGACCCAAATATCCGTAAGAAGGCAGCATTGTGCTCCATAAGAATTATAAAGAAGGTTCCTGACTTGGCAGAAAATTTTATCAATCCTGCTGCTGCATTACTTAAAGAGAAGCATCATGGTGTTTTGATAACTGGAGTTCAACTTTGTACAGATCTATGTAAACTTAGCACCGAAGCTCTTGAACATTTCAGAAAGAAATGCACTGAGGGTTTGGTGAAAACTTTACGAGATCTGGTCAACAGTCCGTACTCGCCTGAATACGACATTTCTGGCATCACAGACCCTTTCCTTCATATCAGATTGCTGAAGCTTTTGCGTGTTTTGGGTCATAGAGATGCTGATGCTAGTGATTGTATGAATGACATACTTGCCCAGGTGGCGACAAAGACTGAATCGAACAAAGTAGCTGGAAATGCCATTTTATATGAGTGTGTTCAGACAATCATGAGTGTTGAAGATAATGGCGGCCTGCGTGTTCTTGCTATCAATATCCTGGGGAGATTCTTGTCGAACCGTGATAACAATATCAGATACGTTGCCCTAAACATGTTAACAAAGGCCATTAGTTTTGATACTCAAGCAGTGCAGAGACACAGGGCCACTATCTTGGAATGTGTGAAGGACTCTGATGCTTCAATTCGGAAGAGAGCCCTTGAACTGGTTTATCTTCTAGTAAATGAGAGTAATGTCAAACCGTTAACAAAGGAACTAATTGATTATCTGGAAGTCAGTGATCAAGAATTCAAGGGGGACCTTACGGCCAAAATTTGCTCTATTGTTGCCAAGTTTTCACCGGAGAAAATTTGGTATATTGACCAAATGCTCAGGGTTCTTTCTGAGGCTGGAAATCTTGTCAAAGATGAGGTATGGTATGCATTAATTGTTGTAATCAGTAATGCATCTGATCTTCATGGCTACACAGTCCGAGCACTGTACAGGGCCCTCCAAGCATCTGTTGAACAGGAAAGTCTTGTTCGGGTAGCAGTGTGGTGCATCGGAGAATATGGAGACATGTTGGTAAACAATATTGGAATGCTGGACGTAGAGGATCCTATAACAGTAACTGAGTCCGATGCAGTGGATGCTGTAGAGGTTGCTATAAAACATCACTTTTCTGATCTTACCACCAAAGCTATGGCTTTGGTTGCCCTGTTGAAACTTTCTTCTCGGTTTTCTTCATGTTCAGAGAGAATCAAAGATGTAGTCATCCATTACAAAAGCAACTTTGTGCTTGAACTGCAGCAAAGATCTATTGAGTTCAACGCTATTATCTCAAAGCATCAAAATATTAGGTCTTCTCTTGTTGAAAGGATGCCTGTTTTAGACGAGGCAACTTTCATTGGTAGGAGAGCTGGCATTGAGGGTTCAGCATCAGCGCCTGCAGTAGCATCACTTAGCCTTCCAAATGGAGTTTCCAAACCTATCGCAGCTCCTCTAGTAGATTTGCTTGATCTAAGTTCAGATGATGCCCCAGCACCAAGTTCCTCTGGTGGAGATCTACTTAATGACCTTCTGGGTGTTGATGTATCCCCTGCTTCACAACCATCAGGTACCAATCAAGCTCAAAAAGGTGGGACGGATGCCCTTTTGGATCTTTTATCAATTGGATCGCCTACTGTGCAAAGTAGCTCATCGATGGCTGATATTTTCTCGAACAATCAAAATAACAAAGCACCTGTTACACAATTGGATGAGCTTTCATCCCTTTCTCTCTCATCGAAGACTACCTCAAACACAGGGGCATCTCCTATGATGGATTTGTTGGATGGGTTTGCCCCCAGCCCAAAAGCACCTGAAAACAATGGTCCGGCTTATCCCTCTATAGTTGCATTTGAGAGCAACTCAGTAAAGATTACATTCAACTTCTCAAAGGCACCAGGAAACCCACAAATAACTACAATCCATGCTACGTTTGAGAATTTGTCATCCACTACCTATACAGATTTTGTTTTCCTGGCAGCAGTGCCTAAGTTTCTTCAGCTGCACTTAGATCCGGCTAGCAGCAACGTCCTTTCAGCAAGTGGTACAGGGTCCATAACACAAAACTTGAGAGTTACTAATAGCCTGCATGGGAAGAAACCACTAGTCATGCGTGTAAGGATAGCTTATAAATTAAACGGCAAAGATACATTAGAAGAAGGCCAAATCAACAACTTTCCTCGTGAATTGTGA	2628	0.422	MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRSAINENDQDYRHRNLAKMMFIHMLGYSTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPAAALLKEKHHGVLITGVQLCTDLCKLSTEALEHFRKKCTEGLVKTLRDLVNSPYSPEYDISGITDPFLHIRLLKLLRVLGHRDADASDCMNDILAQVATKTESNKVAGNAILYECVQTIMSVEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLTKAISFDTQAVQRHRATILECVKDSDASIRKRALELVYLLVNESNVKPLTKELIDYLEVSDQEFKGDLTAKICSIVAKFSPEKIWYIDQMLRVLSEAGNLVKDEVWYALIVVISNASDLHGYTVRALYRALQASVEQESLVRVAVWCIGEYGDMLVNNIGMLDVEDPITVTESDAVDAVEVAIKHHFSDLTTKAMALVALLKLSSRFSSCSERIKDVVIHYKSNFVLELQQRSIEFNAIISKHQNIRSSLVERMPVLDEATFIGRRAGIEGSASAPAVASLSLPNGVSKPIAAPLVDLLDLSSDDAPAPSSSGGDLLNDLLGVDVSPASQPSGTNQAQKGGTDALLDLLSIGSPTVQSSSSMADIFSNNQNNKAPVTQLDELSSLSLSSKTTSNTGASPMMDLLDGFAPSPKAPENNGPAYPSIVAFESNSVKITFNFSKAPGNPQITTIHATFENLSSTTYTDFVFLAAVPKFLQLHLDPASSNVLSASGTGSITQNLRVTNSLHGKKPLVMRVRIAYKLNGKDTLEEGQINNFPREL*	876

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte14g00234	875	ProSiteProfiles	Gamma-adaptin ear (GAE) domain profile.	755	872	IPR008153	-
	Pte14g00234	875	Pfam	Adaptin N terminal region	27	579	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Pte14g00234	875	FunFam	AP-1 complex subunit gamma	2	594	-	-
	Pte14g00234	875	Pfam	Adaptin C-terminal domain	758	872	IPR008152	GO:0006886\|GO:0016192
	Pte14g00234	875	MobiDBLite	consensus disorder prediction	640	676	-	-
	Pte14g00234	875	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	11	863	-	-
	Pte14g00234	875	SUPERFAMILY	Clathrin adaptor appendage domain	733	873	IPR013041	-
	Pte14g00234	875	Gene3D	-	727	874	-	-
	Pte14g00234	875	MobiDBLite	consensus disorder prediction	661	676	-	-
	Pte14g00234	875	PIRSF	AP1_gamma	6	875	IPR017107	GO:0005794\|GO:0016192\|GO:0030121
	Pte14g00234	875	Gene3D	-	2	594	IPR011989	-
	Pte14g00234	875	SMART	alpha_adaptinc2	752	872	IPR008152	GO:0006886\|GO:0016192
	Pte14g00234	875	FunFam	AP-1 complex subunit gamma	744	875	-	-
	Pte14g00234	875	SUPERFAMILY	ARM repeat	25	592	IPR016024	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte14g00234	Pte-Chr14	10005564	10020503	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte14g00234	K12391		-	qsu:112015360	1402.5

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte14g00234	14	10005564	10020503	Pte14g00234	14	10005564	10020503	RCT