Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00202 ATGAAACTTCTTCAATGTCCTCTGCCTTGCCATCCAGACGATGAATCCCAAACTCACTCAGATCATCGTCACCTTCACTCTGACTCGTCCACCTCTTCCCTTTCGTCACAGCCAAGTCTACCTTCTGTTCCTTCTCTAACCCCTCCATCACAACAAGAAGACCGACCCCAGCAACTCACTCAGCACCGCATCTTGACAACCCACAAGGGCCACTCCTCCTACATCTTCTATCTTGCTCTCCATGGAAAATACCTCTACAGTGGCTCGTCAGACAGTGAGATACGGGTATGGCATAAAGACCCTTTTGCTGTAGAATTCTCAAGCCACTCAAACAACGTAGTTGCAGTCAGCAATGGTGCTGTCAAGTGTTTGGCAGTTTTTGGAGACAAGTTGATCAGTGGTCACCAGGACAACAAAATCCGCGTGTGGAAAATCGATCAGCACGGCTGTCCAGACCAGAAATTCAAGTGTGTAGCCACTCTCCCGACATTCAGTGACCGCTTCTCAAGATGCCTGCTAGCAAAGAACTACGTAGAGGTGAGAAGACACAAGAAGTGCACGTGGGTGAATCATGTGGACACAGTTTCTGCACTTGCTGTCTCAAGAGACGGGTCTATGCTTTACTCTGCTTCTTGGGATAGATCTTTCAAAATCTGGAGAACATCAGATTTCAAGTGCTTGGAGTCCGTTAGTAATGCACACGAAGATGCAATCAATGCTCTGGTGTTGTCAAGTGATGGAATCTTTTACACAGGCTCTGCAGATACAAAAATCAAGGTGTGGAAGAAGCAAGCGGGAGACAAAAAGCACACACTGTTGGATACGTTAGAGAAGCATAAGTCAGCTGTGAATGCATTGGCTCTTAGCAATGATGGGTCTGTGTTATATTCAGGTGCATGTGACAGATCCATTCTGGTGTGGGAGAGAAACAGCAGTAGTGATGGAGCTTATGGGAGTATGGTGTTGGTGGGTGCACTGAGAGGGCACACCAAGGCAATCCTGTGTCTTGCAGTTGTGGATGACTTGGTGTGCAGTGGATCAGCTGATAAAACTGTGAGGATATGGAAAAGAGGGTTTGATCAGAAAAGCTATTCATGCTTGGCTGTGCTGGAAGGACATAGAAGACCGATCAAGAGTTTGGCTGCTGCAGTCGATTGCAGCAGCAATGCCAAAATAACTGGTTCTGATACTGCAACTGCTAATAACTGTACTTATTTGGTTTACAGTGGAAGTTTGGACTGTGATATTAAGGTCTGGCAGCTATGTGTACCTAAGCTGTGA 1281 0.4653 MKLLQCPLPCHPDDESQTHSDHRHLHSDSSTSSLSSQPSLPSVPSLTPPSQQEDRPQQLTQHRILTTHKGHSSYIFYLALHGKYLYSGSSDSEIRVWHKDPFAVEFSSHSNNVVAVSNGAVKCLAVFGDKLISGHQDNKIRVWKIDQHGCPDQKFKCVATLPTFSDRFSRCLLAKNYVEVRRHKKCTWVNHVDTVSALAVSRDGSMLYSASWDRSFKIWRTSDFKCLESVSNAHEDAINALVLSSDGIFYTGSADTKIKVWKKQAGDKKHTLLDTLEKHKSAVNALALSNDGSVLYSGACDRSILVWERNSSSDGAYGSMVLVGALRGHTKAILCLAVVDDLVCSGSADKTVRIWKRGFDQKSYSCLAVLEGHRRPIKSLAAAVDCSSNAKITGSDTATANNCTYLVYSGSLDCDIKVWQLCVPKL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 326 356 IPR001680 GO:0005515
Pte14g00202 426 Pfam WD domain, G-beta repeat 65 97 IPR001680 GO:0005515
Pte14g00202 426 Pfam WD domain, G-beta repeat 273 307 IPR001680 GO:0005515
Pte14g00202 426 Pfam WD domain, G-beta repeat 106 144 IPR001680 GO:0005515
Pte14g00202 426 Pfam WD domain, G-beta repeat 323 356 IPR001680 GO:0005515
Pte14g00202 426 Pfam WD domain, G-beta repeat 189 219 IPR001680 GO:0005515
Pte14g00202 426 Pfam WD domain, G-beta repeat 225 262 IPR001680 GO:0005515
Pte14g00202 426 Pfam WD domain, G-beta repeat 365 419 IPR001680 GO:0005515
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 68 97 IPR001680 GO:0005515
Pte14g00202 426 FunFam BnaA09g28200D protein 178 266 - -
Pte14g00202 426 SUPERFAMILY WD40 repeat-like 62 421 IPR036322 GO:0005515
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 326 356 - -
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 308 - -
Pte14g00202 426 MobiDBLite consensus disorder prediction 14 28 - -
Pte14g00202 426 CDD WD40 67 420 - -
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 231 271 IPR001680 GO:0005515
Pte14g00202 426 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 20 421 IPR045182 -
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 308 IPR001680 GO:0005515
Pte14g00202 426 MobiDBLite consensus disorder prediction 1 58 - -
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 188 229 IPR001680 GO:0005515
Pte14g00202 426 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 188 219 - -
Pte14g00202 426 SMART WD40_4 181 220 IPR001680 GO:0005515
Pte14g00202 426 SMART WD40_4 223 262 IPR001680 GO:0005515
Pte14g00202 426 SMART WD40_4 269 308 IPR001680 GO:0005515
Pte14g00202 426 SMART WD40_4 319 356 IPR001680 GO:0005515
Pte14g00202 426 SMART WD40_4 363 420 IPR001680 GO:0005515
Pte14g00202 426 SMART WD40_4 107 144 IPR001680 GO:0005515
Pte14g00202 426 SMART WD40_4 61 98 IPR001680 GO:0005515
Pte14g00202 426 Gene3D - 52 174 IPR015943 GO:0005515
Pte14g00202 426 MobiDBLite consensus disorder prediction 29 58 - -
Pte14g00202 426 Gene3D - 178 423 IPR015943 GO:0005515
Pte14g00202 426 PRINTS G protein beta WD-40 repeat signature 343 357 IPR020472 -
Pte14g00202 426 PRINTS G protein beta WD-40 repeat signature 407 421 IPR020472 -
Pte14g00202 426 PRINTS G protein beta WD-40 repeat signature 131 145 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00202 Pte-Chr14 7866590 7868569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00202 233 399 Acyl Lipid Metabolism Gene Families AT3G18860 25.434 3.89e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00202 - - qsa:O6P43_025357 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00202 14 7866590 7868569 Pte14g00202 14 7866590 7868569 RCT