Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00171 ATGAAGAAGCTAGCCATTTTTATCTCTTTCCATGGTTTCCGTGTCGTCAGTAGTCGTCTACGATTGTGTCCTTCTCAAAATTGCTTCTTGGTTCGGACATGTTCAACTCAGAGATTCTCCCCATTGGGTACTACAAGACCATTTCCTGACTACTCCCCGAAGAAACCCACTGTGAAACACTTTGAGCTTGTGCATCACATCTCTACAACCATACAACAACGCCGGTCAGAACCTCTTAATTGTGTTCTCAAGCCATACAAATCCAACTTCAAGTCTGACCATCTTGTTTGGGTTCTTATGGATATCAAGCATGATTACAAGCTTGTTTTAGATCTTTTTAACTGGGCACGTTTGCATAAAGAATCCAGTTTGGAATCACTTTGCATTGTTGTTCAGATTGCCGTGGCATCTAAGGACCTCAAAATGGCTCACAAATTGGTATCTGAATTCTGGGCAAAGCCCAATTTGGATATTGGTCATTTATTTGGTCGTTTTAGTGGGTTGTTGATATATACATATAAGGACTGGGGCGCAGATCCCCATGTGTTCGATATATTCTTTCAGGTACTTGTAGAAGCTGGGTTTTTCGTAGAAGCAGGAAAGCTGTTTGATAAATTGTTGAGTTATGGGTTAGTTATTTCTGTTGATTCTTGTAATTTCTATTTAAGTCGTCTGTGTAAGGACTTCAATGGGATTGGTAAGGCATGGAAATTTTTTAATGAGTATTCCAAATTGGGCGTTTCTTGGAACACTAATTCATATAACATTGTTATTCATTTACTTTGTCAATTAGGAAAAGTAAAGGAAGCACATAATGTGCTTATACAAATGGAGTTTAGGGGTATGTTGCCAGATGTAGTAAGTTATAGTACCGTAATTTGTGGATATTGTAACATAGGAGAACTTCAAAGGGTGATGAAGCTCATGGATGATATGCTGAGTAGAGGACTAAGACCAAATGAATATACCTACAATAGCATAATCTTGCTTCTGTGCAAGAGTGGTAAAGTGCATGATACACAACAAGTTTTGATAGAAATGGCAACACAGGGAATTTTTCCAGACAAAGTGGTGTACACAACTCTTATAAGCGGTTTCTGTAATCTGAGGAATGTTTCTACTGCTTATAGGCTTTTTCATGAAATGCAAGCAAAGGAAATTGTTCCTGATTATGTGACATATACTGCTGTGCTTCACGGTTCTTGTCAAACTGGAAAAATGGAGGAAGCTCGTAGGCTCTTTGATGAAATGATTAGGAAGGGGCTGCAACCAGATGAAGTCACTTATACAGCACTTATTAATGGATACTGCAAAGCAGGTGAGATTAAAGAGGCTTTTTCTCTTCACAATCAGATGATTCAGCTGGGATTGACTCCAAATATTGTCACTTATTCAGCTCTCGTTGATGGTCTTTGTAAACGTGGGGAACTTGATACAGCAAACGAGCTTCTACATGAGATGTGCAGTAAGGGCCTTCAACTTAATGTTGTTACTTATAACAGCATCATCCACGGCCTTTGTAAAATTGGAAATGTTCTGCAAGCAGTGAAATTGATGGAAGAAATGGAAGTTGCAGGACCCTACCCTGACACCTTTACATATACGACTCTAATGGATGCTTATTGTAAGATGGGAGAAATGGTGAAGGCTCATGAACTTTTAAGAAATATGCTAGAGAAAGGTCTTCAACCTACGATTGTCACATTTAATGTGCTGATGAACGGCTTCTGTATGTATGGAATGCTGGAGGATGGTGAAAGGCTAATAAAATGGATGTTAGAGAAGGATATAATGCCCAATTCCACAACGTACAACTCTCTTATAAAACAGTATTGTAACAGAAATAACATGAAGGCATCGACTGAGATTTTCAAAGGACTGCATTCTATTGGGATAATGCCTGATGGCAACACTTACAACATATTAATAAGAGGACATTGCAAAGCTAGGAATATGAAAGAAGCATGTTTTTTGCACAAAGAGATGCTTGAACACGGATTCACTCTCACTACTAGTTCATATAATGCTCTCATAAAAGGTTTCTGCAAGAGAAAGAAGTATGATGAGGCCAGACATTTCTTTGAAGAGATGAGGAGACAAGGGTTAGTTGCAGAAAAGGAGATATATGACATTTTTGTCGATTTGAACCACGAGGCAGGGAACATAAAATCTACTCTGGATCTCTGCGATGAAGCTATTGAGAAATGTCTTGTTGGAATTGGCCAAAAGTAG 2232 0.3866 MKKLAIFISFHGFRVVSSRLRLCPSQNCFLVRTCSTQRFSPLGTTRPFPDYSPKKPTVKHFELVHHISTTIQQRRSEPLNCVLKPYKSNFKSDHLVWVLMDIKHDYKLVLDLFNWARLHKESSLESLCIVVQIAVASKDLKMAHKLVSEFWAKPNLDIGHLFGRFSGLLIYTYKDWGADPHVFDIFFQVLVEAGFFVEAGKLFDKLLSYGLVISVDSCNFYLSRLCKDFNGIGKAWKFFNEYSKLGVSWNTNSYNIVIHLLCQLGKVKEAHNVLIQMEFRGMLPDVVSYSTVICGYCNIGELQRVMKLMDDMLSRGLRPNEYTYNSIILLLCKSGKVHDTQQVLIEMATQGIFPDKVVYTTLISGFCNLRNVSTAYRLFHEMQAKEIVPDYVTYTAVLHGSCQTGKMEEARRLFDEMIRKGLQPDEVTYTALINGYCKAGEIKEAFSLHNQMIQLGLTPNIVTYSALVDGLCKRGELDTANELLHEMCSKGLQLNVVTYNSIIHGLCKIGNVLQAVKLMEEMEVAGPYPDTFTYTTLMDAYCKMGEMVKAHELLRNMLEKGLQPTIVTFNVLMNGFCMYGMLEDGERLIKWMLEKDIMPNSTTYNSLIKQYCNRNNMKASTEIFKGLHSIGIMPDGNTYNILIRGHCKARNMKEACFLHKEMLEHGFTLTTSSYNALIKGFCKRKKYDEARHFFEEMRRQGLVAEKEIYDIFVDLNHEAGNIKSTLDLCDEAIEKCLVGIGQK* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00171 743 FunFam Pentatricopeptide repeat-containing protein At5g39710 444 549 - -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 462 495 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 427 461 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 287 321 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 532 565 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 392 426 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 567 600 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 253 286 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 673 703 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 638 670 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 357 390 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 497 531 IPR002885 -
Pte14g00171 743 NCBIfam pentatricopeptide repeat 322 355 IPR002885 -
Pte14g00171 743 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 375 625 - -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Pte14g00171 743 Gene3D Tetratricopeptide repeat domain 453 525 IPR011990 GO:0005515
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 425 459 IPR002885 -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Pte14g00171 743 Gene3D Tetratricopeptide repeat domain 338 445 IPR011990 GO:0005515
Pte14g00171 743 Gene3D Tetratricopeptide repeat domain 526 620 IPR011990 GO:0005515
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 320 354 IPR002885 -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 600 634 IPR002885 -
Pte14g00171 743 Pfam PPR repeat 456 487 IPR002885 -
Pte14g00171 743 Pfam PPR repeat 246 278 IPR002885 -
Pte14g00171 743 Pfam PPR repeat 351 383 IPR002885 -
Pte14g00171 743 Gene3D Tetratricopeptide repeat domain 621 738 IPR011990 GO:0005515
Pte14g00171 743 Gene3D Tetratricopeptide repeat domain 183 337 IPR011990 GO:0005515
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Pte14g00171 743 FunFam Pentatricopeptide repeat-containing protein At5g39710 338 443 - -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 565 599 IPR002885 -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Pte14g00171 743 SUPERFAMILY TPR-like 357 696 IPR011990 GO:0005515
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 530 564 IPR002885 -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 670 704 IPR002885 -
Pte14g00171 743 Pfam PPR repeat family 495 543 IPR002885 -
Pte14g00171 743 Pfam PPR repeat family 634 683 IPR002885 -
Pte14g00171 743 Pfam PPR repeat family 389 438 IPR002885 -
Pte14g00171 743 Pfam PPR repeat family 564 613 IPR002885 -
Pte14g00171 743 Pfam PPR repeat family 284 333 IPR002885 -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 635 669 IPR002885 -
Pte14g00171 743 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 250 284 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00171 Pte-Chr14 7084263 7086494 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00171 39 738 Glycosyltransferase AT1G05670 59.286 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00171 - - gmx:100789069 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00171 14 7084263 7086494 Pte14g00171 14 7084263 7086494 RCT