Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01259 ATGGAAGCCAAGCCACAGAGCAGACAACTGCAACTTGACTGGGAAGCTCTCTTGCCCAGTCGGGAAGATGAACAGAAGGTTGAATTGATCATTTCGCCTACTGGAGCCTCAGAAACAAACGGCAACCCAGACCCACCAAAAATGCAGACCGATGTTAACTATGATGAACAGGTTTCCAGTATGGGCGATTGGGAACTCCAACAGAAAATTAAGAGGATGAGGGGTCTCGCTCAGTCAATAAAATTGATAGATAATGGTGAGAAACTTCATGCCAGACTGAAGCTTTTGGAGGAAGAGGAGGAACGGAGGAAACGTCGGCGTATTGAGGAGGACAACCAAAAGGAAGTTCGTGGATGTGAAAAACGAATAGAAGTTACAAGTTCAAGTACTCATGGTGCTTTCAGTGACTTCAGGGAAGATGCTGGCTTGTTCTCATCTCTATCCAAGTCCTCATTTGCATCTGCTTTCTATAAGAAGATGGAAGATACTGGTTATAAGAAGGTCAATGCATTTGACAAAGAGTTGGCGTATTTCAAACACTGTGACCGCCAGAAAACTAGACATAATGGAGAATTTACACGAAGGGGAAGAAAGAGAGCTCAATCTTCATCAAGACAGCTGCCTTTTAAATGCCCTCTCAATCTTTCAAAACAAGTCTTCAATGATCATAAAGAAGGTTGTGCCCCACCTTTTTTTTCTCAGCAACATGTTGAGGAAAAAGTGCCAAGTTGGTTCACGAAAGGGAATGATAGTCCTCAACTAACAAAGTCTTATGATATAAAGTCAAAGAAGGGGGAAACCATTGTTCTCGTAGATGATGATGATTCTCTCGATATGAAGGAAAGCGAGCAAGTAGTCAAGCTTGATGAACGCTTGAAAGATGCTAAAATCTACTATCCAACAAGGGATGACCCAAAATCTGTTGAGATTTGCTACATTGACATTCAATGCCTTGCTCCTAAGGGGTACTTAACATCAACTATAATGAACTTTTATATACGATATCTTAAGGAGCAAGCATCTCTGACTGGAAAATTTTCTTCTGATTATCATTTCTTCAACACATATTTCTACAAGAAGCTCAAAGAGGCTGTTTCCTACAAGGGGGTTGACGAAGATGCATTTTTTGTGAAGTTCAGAAGATGGTGGAGGGGTGTATGTATTTTCCTGAAGGCATACATTCTGATTCCCATACATGAAGAGCTTCATTGGAGCTTGGTGATCATTTGCAATCCAGACAAGGAGGGAGAATCTGCGCCGATCGTACTTCATTTGGATTCTTTAGGCCTTCACTCTAGTAGAACGATTTTCGAGAACATAAGAAGGTTCATTTCAAAAGAATGGAACTATTTGGAGCAAGAAGGTGCATGCTCAGATCTTTCAAACGTGGATAGAGTATGGAAATATCTTCCTCGTGAAGTTGATGTGAGAAAAATGAAGGTTCCCCAGCAAAAGAATGACTATGACTGTGGCCTGTTTGTGCTTTATTTCATTGAGCGTTTTATTGATGATGCTCCTCAGAGACTGAAGAAGAATGATTTAGCAATGTTTGAAAAGCAGTGGTTCAGACCTGAAGAGGCATCTGGATTGAGAACAAAAATCCGAAATTTACTCCAACAAGAATTTGAGAAGGCGTTCCCTATCAACGTTAGTCCAGAGTCATCACACCCAGCAATTGTTTCAGTAGATGAAAACTTCGACAGTTCCGAGGACTCTGGATAA 1722 0.4111 MEAKPQSRQLQLDWEALLPSREDEQKVELIISPTGASETNGNPDPPKMQTDVNYDEQVSSMGDWELQQKIKRMRGLAQSIKLIDNGEKLHARLKLLEEEEERRKRRRIEEDNQKEVRGCEKRIEVTSSSTHGAFSDFREDAGLFSSLSKSSFASAFYKKMEDTGYKKVNAFDKELAYFKHCDRQKTRHNGEFTRRGRKRAQSSSRQLPFKCPLNLSKQVFNDHKEGCAPPFFSQQHVEEKVPSWFTKGNDSPQLTKSYDIKSKKGETIVLVDDDDSLDMKESEQVVKLDERLKDAKIYYPTRDDPKSVEICYIDIQCLAPKGYLTSTIMNFYIRYLKEQASLTGKFSSDYHFFNTYFYKKLKEAVSYKGVDEDAFFVKFRRWWRGVCIFLKAYILIPIHEELHWSLVIICNPDKEGESAPIVLHLDSLGLHSSRTIFENIRRFISKEWNYLEQEGACSDLSNVDRVWKYLPREVDVRKMKVPQQKNDYDCGLFVLYFIERFIDDAPQRLKKNDLAMFEKQWFRPEEASGLRTKIRNLLQQEFEKAFPINVSPESSHPAIVSVDENFDSSEDSG* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01259 573 ProSiteProfiles Ubiquitin-like protease family profile. 308 501 IPR003653 GO:0006508|GO:0008234
Pte12g01259 573 SUPERFAMILY Cysteine proteinases 294 540 IPR038765 -
Pte12g01259 573 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 9 555 - -
Pte12g01259 573 MobiDBLite consensus disorder prediction 30 51 - -
Pte12g01259 573 MobiDBLite consensus disorder prediction 32 51 - -
Pte12g01259 573 Gene3D - 299 539 - -
Pte12g01259 573 Gene3D - 350 478 - -
Pte12g01259 573 Pfam Ulp1 protease family, C-terminal catalytic domain 323 525 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01259 Pte-Chr12 34738064 34749059 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01259 K16287 - qsa:O6P43_033152 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01259 12 34738064 34749059 Pte12g01259 12 34738064 34749059 RCT