Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01245 ATGGTTGATTTGTTCATCAACATTAAATGTTCTGTTGTTGAGATGTCCTATAATGTTTATGAGTCTTCTCCAAGGGACATGATTCGGGCTATACGTGCTTGTAAGACTGCAGCTGAGGAGCGTGCTGTTGTAAGAAAAGAATGTGCTGCCATACGTGCTGCAATTGATGAAAATGATCAAGATTATCGACATCGTAACTTGGCGAAGATGATGTTCATCCACATGCTTGGTTACCCCACTCATTTTGGTCAAATGGAGTGCCTAAAGTTGATCGCATCCCCTGGATTTCCAGAGAAAAGAATAGGTTACCTGGGCCTGATGTTGCTTCTTGATGAAAGACAAGAAGTTCTAATGTTGGTCACAAACTCTTTGAAACAAGATCTTAATCACTCAAACCAGTATATAGTTGGACTTGCTCTTTGTGCTTTAGGAAATATTTGTTCAGCAGAAATGGCGCGTGATCTAGCACCAGAAGTCGAAAGATTACTGCAATTTCGTGATCCAAATATCCGAAAGAAGGCAGCATTGTGCTCCATAAGAATAATAAAGAAGGTTCCTGACTTGGCAGAAAATTTTATAAATCCTGCTGCTGCATTACTTAAAGAAAAGCATCACGGGGTTTTGATAACTGGGCTTCAACTTTGTACAGATCTATGTAAACTTAGCACAGATGCTCTTGAACATTTCAGAAAGAAATGCACTGAGGGTTTGGTGAAAACTTTAAGAGATCTAGTCAACAGCCCATACTCACCTGAATACGACATTTCTGGGATCACAGACCCTTTCCTTCATATCAGATTGCTGAAGCTTTTGCGTGTTTTGGGTCATGGAGATGCTGATGCTAGTGACTGTATGAATGACATACTTGCCCAGGTGGCGACAAAGACCGAGTCGAACAAAGTAGCTGGTAATGCCATTTTATACGAGTGTGTTCAGACAATCATGAGTGTTGAAGATAATGGCGGTCTGCGAGTTCTTGCTATCAATATTCTGGGAAGATTCTTGTCAAACCGTGATAACAATATCAGATACGTTGCCCTAAACATGTTAACGAAGGCCATTAGTTTTGATACTCAAGCAGTACAGAGACACCGGGCAACTATCTTGGAATGTGTAAAGGACTCTGATGCTTCTATTCGGAAGAGGGCCCTTGAACTGGTTTATCTTCTAATAAATGAGAGCAATGTGAAACCCTTAACAAAGGAACTGATTGATTATCTGGAAGTCAGTGATCAAGAATTCAAGGGGGACCTTACGGCCAAAATTTGCTCTATTGTTGCCAAGTTTTCACCGGAGAAAATTTGGTATATTGACCAGATGCTCAGGGTTCTCTCCGAGGCTGGAAATCTTGTCAAAGATGAGGTATGGCATGCATTAATTGTTGTAATCAGTAATGCATCTGCTCTTCATGGATACACCGTCCGGGCACTGTACACGGCGCTCCAAGCATCTGTTGAACAGGAAAGTCTTGTTCGGGTAGCAGTATGGTGCATTGGAGAATATGGAGACATGTTGGTAAATAATGTTGGAATGCTCAACATAGAGGATCCTATAACGGTAACCGAGTCAGATGCAGTGGACGCTGTAGAGGTCGCTATAAAATGTCACTCTTCTGATCTTACCACCAAAGCTATGGCTTTGGTTGCCCTATTGAAACTTTCTTCGCGGTTTCCTTCATGTTCAGAGAGAATCAAAGATATAGTTGTCCATTACAAAAGCGACCTTGTGCTTGAATTGCAGCAAAGATCTATCGAGTTCAATGCTGTTATATCAAAGCATCAAAAAATTAGGTCTGCTCTTGTTGAAAGGATGCCTGTTTTAGATGAGGCAACTTTCATTGGTAGGAGAGCTGACATTGAGGGTACGGCGTCAGCTCCTGCAGTGGCATCACTTAGTCTTCCAAACGGAGTTTCCAAATCTGCTGCAGCTCCTCTAGTAGATTTACTTGATCTAAGTTCAGAGGATGCTCCAGCACCAAGTTCCTCTGGGGGAGATCTACTTAATGACCTTCTGGGTGTTGATATATCCCCTGCTTCACAACCATCCGGGGCTAATCTATTGCAAAAAAGTGGAACAGATGCCCTTTTGGATCTTTTATCGATTGGATCACCTCCTGTGCAAAGTAGCTCACTGATGGCAAACAGTTTCTCTGCTAATCAAAATAACAAAGAACCAGCGACACAATTGGATTTACTTTCATCCCTTTCACTCTCATCTAAGGCTACCTCAAACACAGGGGCATCTCCTATGATGGATTTGTTGGATGGGTTTACCCCCAGCTCAAAAACAACTGAAAACAATGGTCCAGCTTATCCATCTGTAGTTGCATTTGAGAGTAACTCAGTAAAGGTTACGTTCAACTTTTCAAAGGCACCAGGAAACCCACAAACAACTACAATCCATGCCACGTTTACGAATTTGTCATCCGCTGCCTATACCGACTTTGTTTTCCAGGCAGCAGTGCCTAAGTTTCTTCAGCTGCACTTAGATCCAGCTAGTGGCAATGTCCTTCCAGCTAGCGGTACAGGGTCCATCACACAAAACTTGAGAGTTACTAATAGCCTGCATGGAAAGGTATGCAACTTCTTTTTTTGGCATCCAAGTGTGTGCAGTAATATTATCTATCCCTTAAAGATGCATTTTCAAGGCTTGTTTGGGTTGTTCACACTTTTGTTTCCTTAA 2682 0.4206 MVDLFINIKCSVVEMSYNVYESSPRDMIRAIRACKTAAEERAVVRKECAAIRAAIDENDQDYRHRNLAKMMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPAAALLKEKHHGVLITGLQLCTDLCKLSTDALEHFRKKCTEGLVKTLRDLVNSPYSPEYDISGITDPFLHIRLLKLLRVLGHGDADASDCMNDILAQVATKTESNKVAGNAILYECVQTIMSVEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLTKAISFDTQAVQRHRATILECVKDSDASIRKRALELVYLLINESNVKPLTKELIDYLEVSDQEFKGDLTAKICSIVAKFSPEKIWYIDQMLRVLSEAGNLVKDEVWHALIVVISNASALHGYTVRALYTALQASVEQESLVRVAVWCIGEYGDMLVNNVGMLNIEDPITVTESDAVDAVEVAIKCHSSDLTTKAMALVALLKLSSRFPSCSERIKDIVVHYKSDLVLELQQRSIEFNAVISKHQKIRSALVERMPVLDEATFIGRRADIEGTASAPAVASLSLPNGVSKSAAAPLVDLLDLSSEDAPAPSSSGGDLLNDLLGVDISPASQPSGANLLQKSGTDALLDLLSIGSPPVQSSSLMANSFSANQNNKEPATQLDLLSSLSLSSKATSNTGASPMMDLLDGFTPSSKTTENNGPAYPSVVAFESNSVKVTFNFSKAPGNPQTTTIHATFTNLSSAAYTDFVFQAAVPKFLQLHLDPASGNVLPASGTGSITQNLRVTNSLHGKVCNFFFWHPSVCSNIIYPLKMHFQGLFGLFTLLFP* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01245 893 SUPERFAMILY ARM repeat 39 604 IPR016024 -
Pte12g01245 893 Pfam Adaptin C-terminal domain 772 854 IPR008152 GO:0006886|GO:0016192
Pte12g01245 893 Pfam Adaptin N terminal region 41 593 IPR002553 GO:0006886|GO:0016192|GO:0030117
Pte12g01245 893 Gene3D - 745 863 - -
Pte12g01245 893 FunFam AP-1 complex subunit gamma 18 608 - -
Pte12g01245 893 SUPERFAMILY Clathrin adaptor appendage domain 747 858 IPR013041 -
Pte12g01245 893 PIRSF AP1_gamma 21 860 IPR017107 GO:0005794|GO:0016192|GO:0030121
Pte12g01245 893 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 25 856 - -
Pte12g01245 893 SMART alpha_adaptinc2 766 867 IPR008152 GO:0006886|GO:0016192
Pte12g01245 893 Gene3D - 12 608 IPR011989 -
Pte12g01245 893 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 769 889 IPR008153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01245 Pte-Chr12 34406412 34422031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01245 K12391 - qsu:112015360 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01245 12 34406412 34422031 Pte12g01245 12 34406412 34422031 RCT