Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01241 ATGGCTGGAGGTGGAACACAAGCACCCCCGCCAAAACAAGAAGAACATCAACCCCATCCAGTCAGAGATCAACTGCCCAACGTTTCTTACTGCATAACCAGCCCTCCTCCATGGCCGGAGGCCATCTTGCTGGGTTTCCAACACTACCTTGTGATGCTTGGGACAACGGTTCTAATTCCCACTTCTCTAGTTCCTCAGATGGGAGGAGGAAATGAAGAGAAAGCAAAGATGATTCAGACTCTTCTGTTTGTGGCTGGGTTGAATACATTTTTTCAATCACTGTTCGGAACTCGTTTACCAGCTGTAATAGGGGGTTCTTACACCTTTGTGCCAACAACTATTTCAATCATCTTGGCTGGTCGTTACAGTAACATCTTGAATCCACAAGAGAAATTTGAAAGAATAATGCGTGGAACTCAAGGAGCCCTTATCGTTGCTTCTACTCTCCAAATTGTTCTTGGTTTCAGTGGACTTTGGCGCAATGTTGCCAGGTTCTTAAGCCCCCTCTCTGCTGTTCCTCTGGTTGCTTTGTCAGGCTTTGGGTTATATGAGCTAGGTTTCCCTGTGCTTGCCAGATGCGTGGAGATTGGGCTGCCAGAACTCATTATTCTACTAGTTTTCTCACAGTACATTCCTCATATAATGAAAGGCGAGAGGCATGTGTTTGATAGATTTGCAGTCATATTCTCAGTGGGAATTGTGTGGCTTTACGCTCACCTTCTGACAGTGGGGGGAGCCTATAAGAATGCAAAGCCCAAAACTCAACTAACTTGCAGAACGGACCGTGCAGGAATTATAAGTGGTGCTCCATGGATTAGAGTTCCATATCCATTTCAGTGGGGTGCTCCTACATTTGATGCAGGAGAAGCTTTCGCAATGATGGCTGCCTCCTTTGTTGCTCTTGTAGAGTCTACTGGTGCTTTTATTTCTGTGTCAAGATATGCAAGTGCCACTCCATTGCCTCCTTCTGTTCTTAGTCGCGGTGTTGGTTGGCAGGGAGTTGGAATTCTGTTATCTGGGATCTTTGGAACTGGGAATGGATCATCCGTTTCTGTAGAGAATGCTGGCCTTTTAGCCTTAACGCGTGTTGGTAGCAGAAGGGTTGTTCAAATATCAGCTGGTTTCATGATCTTCTTCTCCATTCTTGGAAAATTTGGGGCTGTCTTCGCTTCAATCCCGGGCTCAATTGTGGCAGCTCTATACTGCCTCTTCTTTGCATATGTGGGAGCCTCCGGCCTCAGCCTCCTTCAGTTCTGCAATTTGAACAGCTTTAGAACCAAGTTTATTTTAGGCTTCTCAGTCTTCATGGGACTTTCAATCCCACAATACTTCAATGAGTACACAGCATTTAATGGTTATGGTCCTGTCCACACAAGAGCCAGATGGTTCAATGATATGGTGAATGTTCCATTGTCATCAGAAGTATTTGTAGCTGGTTTCTTGGCCTTGTTCTTGGACACATCTTTGCACAGAAAAGATAGTCAAAGCCGTAAGGATAGGGGAATGCATTGGTGGGATAGATTCCGTTCATTCAAGACAGATACTAGGAGTGAAGAATTCTATTCTCTCCCATTCAATCTCAACAAGTATTTCCCATCTGTGTGA 1605 0.4505 MAGGGTQAPPPKQEEHQPHPVRDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTSLVPQMGGGNEEKAKMIQTLLFVAGLNTFFQSLFGTRLPAVIGGSYTFVPTTISIILAGRYSNILNPQEKFERIMRGTQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVALSGFGLYELGFPVLARCVEIGLPELIILLVFSQYIPHIMKGERHVFDRFAVIFSVGIVWLYAHLLTVGGAYKNAKPKTQLTCRTDRAGIISGAPWIRVPYPFQWGAPTFDAGEAFAMMAASFVALVESTGAFISVSRYASATPLPPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPGSIVAALYCLFFAYVGASGLSLLQFCNLNSFRTKFILGFSVFMGLSIPQYFNEYTAFNGYGPVHTRARWFNDMVNVPLSSEVFVAGFLALFLDTSLHRKDSQSRKDRGMHWWDRFRSFKTDTRSEEFYSLPFNLNKYFPSV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01241 534 Pfam Permease family 40 444 IPR006043 GO:0016020|GO:0022857|GO:0055085
Pte12g01241 534 MobiDBLite consensus disorder prediction 1 26 - -
Pte12g01241 534 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 532 - -
Pte12g01241 534 NCBIfam purine/pyrimidine permease 42 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01241 Pte-Chr12 34169552 34172884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01241 8 535 Organic Solute Cotransporters AT1G60030 82.765 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01241 - - gmx:100776272 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01241 12 34169552 34172884 Pte12g01241 12 34169552 34172884 RCT