Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01228 ATGGATATTCTGGGGTTATTTCTCCTTGTCTCCATTGCCACACCTTCCTGCTTCTCTTACAGTCTTCAAACAGAGGCGAACTCAAATGGACACTCCTCATTTAGAAACCAAATTCTTACTTTGGCTAATGATGTCAACACTGTGAATTGGATGAAGCAGATTAGGAGAGAAATTCATGAGTACCCTGAACTTGCTTTTGAGGAATTCAAGACAAGTGCTGTTATCAGGCGTGAGCTGGACAAGTTGGGTGTTTCATATAATTGGCCTGTAGCAAGAACAGGCATCGTTGCTAAGATTGGTTCTGGTTCTCCACCCTTTGTTGCTCTTAGAGCAGATATGGATGCTTTGCCTATACAGGAGTTAGTAGAGTGGAAGCACAAGAGCAAAGAAAACGGGAAAATGCATGCCTGTGCACATGATGGCCATGTTTCCATGCTCCTTGGGGCTGCAAAAGTTTTGCAAGAAATTAGACTCAGACTACAGGGTACAGTTGTGCTCATCTTCCAACCAGGTGAGGAAAGAGGTGTAGGTGCAAAAGAAATGATCAAGGAAGGAGTACTTGAAAATGTAGAGGTCATACTGGGATTGCATTTGGCAACCAACTATCCCCTCGGAGTTGTTGCATCTCGGCCTGGAGAATTTCTTGCTGGCTGTGGTAGCTTCAAAGCAAAGATTTTTGGAAAAGGAGGTCATGCAGCAATTCCACAACAATCCATTGATCCGATTTTGGCTGCTTCCACATCCATAATAAGTTTGCAACATATAGTTTCAAGGGAGACAGATCCTTTAGATTCTCAGGTGGTTTCCGTAGCAAAGATCGAGGCAGGAACTGCACATAATATTATCCCAGATTCAGCTACCATTTCTGGTACTTTTCGTGCACTTCGCAAAAAGAACTTCTATGCACTCAGGGAAAGAATAGAAGAGGTGATAAAAGGGCAAGTAGGAGTCCATAGATGCACCGCAGAGGTAGAGTTCCACGGGAGTGAACATCCAACAGTACCACCAACCGTAAATGATCACAGAATATATGATTTTGCAAGGAATGTTTCAATGGAGATTGTAGGAGAAGAAAATGTAGAGTTAGCACCAACCTTCACTGGAAGTGAAGATTTTGCATTTTACTTGGACAAGGTTCCAGGATCGTTCTTACTGGTGGGAACAAGAAATGACAAGAGTGGAGCTGTGTATCCAGCACATAGCCCTTACTTTTTCATTGACGATGATGTGCTTCCCATCGGAGCAGCCATACATGCGGCCTTTGCTTATTCTTACCTATTAAATTCAACCACAAACTTCTATTCTCATTAG 1311 0.4294 MDILGLFLLVSIATPSCFSYSLQTEANSNGHSSFRNQILTLANDVNTVNWMKQIRREIHEYPELAFEEFKTSAVIRRELDKLGVSYNWPVARTGIVAKIGSGSPPFVALRADMDALPIQELVEWKHKSKENGKMHACAHDGHVSMLLGAAKVLQEIRLRLQGTVVLIFQPGEERGVGAKEMIKEGVLENVEVILGLHLATNYPLGVVASRPGEFLAGCGSFKAKIFGKGGHAAIPQQSIDPILAASTSIISLQHIVSRETDPLDSQVVSVAKIEAGTAHNIIPDSATISGTFRALRKKNFYALRERIEEVIKGQVGVHRCTAEVEFHGSEHPTVPPTVNDHRIYDFARNVSMEIVGEENVELAPTFTGSEDFAFYLDKVPGSFLLVGTRNDKSGAVYPAHSPYFFIDDDVLPIGAAIHAAFAYSYLLNSTTNFYSH* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01228 436 Gene3D Zn peptidases 52 411 - -
Pte12g01228 436 SUPERFAMILY Zn-dependent exopeptidases 48 428 - -
Pte12g01228 436 Pfam Peptidase family M20/M25/M40 108 422 IPR002933 GO:0016787
Pte12g01228 436 PANTHER PEPTIDASE M20 FAMILY MEMBER 23 433 IPR017439 GO:0016787
Pte12g01228 436 Pfam Peptidase dimerisation domain 217 312 IPR011650 -
Pte12g01228 436 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 335 IPR036264 -
Pte12g01228 436 CDD M20_IAA_Hyd 51 426 IPR044757 GO:0009850|GO:0016787
Pte12g01228 436 PIRSF Amidohydrol_AmhX 39 429 IPR017439 GO:0016787
Pte12g01228 436 FunFam N-acetyldiaminopimelate deacetylase 216 333 - -
Pte12g01228 436 NCBIfam amidohydrolase 51 414 IPR017439 GO:0016787
Pte12g01228 436 Gene3D - 216 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01228 Pte-Chr12 33753306 33756075 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01228 K14664 - qsu:111993955 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01228 12 33753306 33756075 Pte12g01228 12 33753306 33756075 RCT