Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01219 ATGGCAACGACTCGCATGTTAACTTCCTCAACTCGATCCAATCTGCTCAAACCCATCTACAGTGCTTTAACACGTTCAGTTCCATCTCTTTGCCGTTCGATCTCAACGGATGATTCCAGAACGCTTACAATCGAGATCAACGTGCCCTTCACAGCTCACAACTGTGAGCCGCCGTCACGGTCCATCGAGACCACGCCCAGCGAGCTCCTCAAATTCTTCAAAGACATGGCTTTGATGCGTAGGATGGAGATCTCTGCCGATTCGCTTTACAAAGCTAAGCTGATTCGTGGGTTTTGTCATTTATATGATGGTCAAGAAGCCGTGGCTATGGGTATGGAAGCGGCAATTACCAGGAAAGATTGTATAATTACTGCTTACAGAGATCATTGTATTTTTGTGTGTCGTGGTGGCACTTTGGTTGAGGTTTTTGCAGAATTAATGGGTAGGCAATCTGGTTGTTCTAATGGAAAAGGTGGATCCATGCATTTCTATAGGAAGGAGACTAATTTCTATGGCGGTCATGGAATTGTGGGTGCTCAGGTTCCCCTCGGGTGTGGTTTGGCTTTTGCACAGAAGTATAAAAAGGAAGAACATGTGACTTTTGCTTTGTATGGTGACGGAGCTGCCAATCAGGGACAATTGTTTGAGGCTCTTAATATGGCTGCACTCTGGGACCTTCCAGCCATATTGGTTTGTGAGAACAATCATTATGGCATGGGAACGGCAGAGTGGAGGGCAGCTAAGAGTCCGGATTACTATAAGCGTGGTGATTATGTTCCCGGGTTGAAGGTAGATGGCATGGATGTGTTTGCTGTGAAACAGGCATGCAAATTTGCAAAAGATCACGCTTTGAAGAATGGACCCATTATCCTTGAGATGGACACTTACCGGTACCATGGGCACTCCATGTCGGATCCTGGAAGCACATACCGTACACGTGATGAGATATCTGGCATTAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGTTATTATCACATGATCTTGCTACTGAAAAGGAGCTAAAGGAAATGGACAAAGCAATCAGAAAAGAAGTAGATGATGCCATCGCGAAAGCAAAGGAAAGTCCAATGCCAGAACCATCTGAACTCTTTACCAACGTATACGTGCAAGGTGTTGGTGCTGAGTCCTTTGGAGCAGATAGGAAAGAAGTCAGAACAGTGCTTCCATAG 1200 0.4558 MATTRMLTSSTRSNLLKPIYSALTRSVPSLCRSISTDDSRTLTIEINVPFTAHNCEPPSRSIETTPSELLKFFKDMALMRRMEISADSLYKAKLIRGFCHLYDGQEAVAMGMEAAITRKDCIITAYRDHCIFVCRGGTLVEVFAELMGRQSGCSNGKGGSMHFYRKETNFYGGHGIVGAQVPLGCGLAFAQKYKKEEHVTFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPDYYKRGDYVPGLKVDGMDVFAVKQACKFAKDHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGIRQERDPIERVRKLLLSHDLATEKELKEMDKAIRKEVDDAIAKAKESPMPEPSELFTNVYVQGVGAESFGADRKEVRTVLP* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01219 399 Gene3D - 29 393 - -
Pte12g01219 399 FunFam Pyruvate dehydrogenase E1 component subunit alpha 32 392 - -
Pte12g01219 399 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 37 382 - -
Pte12g01219 399 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 67 379 IPR017597 GO:0004739|GO:0006086|GO:0043231
Pte12g01219 399 CDD TPP_E1_PDC_ADC_BCADC 72 362 - -
Pte12g01219 399 Pfam Dehydrogenase E1 component 75 370 IPR001017 GO:0016624
Pte12g01219 399 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 59 380 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01219 Pte-Chr12 33564777 33568522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01219 1 400 Acyl Lipid Metabolism Gene Families AT1G24180 77.057 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01219 K00161 - zju:107428751 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01219 12 33564777 33568522 Pte12g01219 12 33564777 33568522 RCT