Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01209 ATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGATGTGGTTGGGGAATATCTCCACGTGGTGCTGGTTATACATTTGGACAAGATATAGCTGCCTCATTTAATCATACCAACGGTCTTTCCTTGATATCCAGAGCCCACCAACTTGTCATGGAAGGATACAATTGGTGTCAGGATAAGAATGTGGTGACAGTATTTAGTGCTCCAAACTACTGTTATCGTTGTGGGAATATGGCTGCAATACTCGAGATTGGAGAGAATATGGACCAGAATTTTTTGCAGTTTGATCCTGCTCCTCGGCAAGTTGAGCCTGATACCACGCGCAAAACTCCTGATTATTTTTTGTGA 348 0.431 MCDLLWSDPDDRCGWGISPRGAGYTFGQDIAASFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQVEPDTTRKTPDYFL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01209 115 Gene3D - 1 115 IPR029052 -
Pte12g01209 115 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 115 IPR047129 GO:0004722
Pte12g01209 115 SMART pp2a_7 1 99 IPR006186 GO:0016787
Pte12g01209 115 SUPERFAMILY Metallo-dependent phosphatases 1 102 IPR029052 -
Pte12g01209 115 PRINTS Serine/threonine phosphatase family signature 39 59 IPR006186 GO:0016787
Pte12g01209 115 PRINTS Serine/threonine phosphatase family signature 61 77 IPR006186 GO:0016787
Pte12g01209 115 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01209 Pte-Chr12 33277209 33277882 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01209 K04382 - qsu:111997024 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01209 12 33277209 33277882 Pte12g01209 12 33277209 33277882 RCT