Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01202 ATGGGCTTTCAACTGCTATGGCTCTTTGTTATGTTCGCAACTGTAAGTTTTGGAGAGGAAGATAAAATTGCAGAAGGGTGCAGCCCTGATGATCTGAAAGGTCTATTGAGTTTTAGAAATGACATTCACATTGACACATCTGGCCGTCTGGCAAAGTGGGTTGGTCACAATTGCTGCAGCTGGGAAGGCATAGTTTGTGAAAACATAACAAATAATAATAGAGTGATAGAGATTCATCTCCCAGGATTCATTTCGAATGATGAATTTCTTTACCAATCCCAGATGACAGGATGGCTTTCTCCTTCCATCACACTCATCACTGCTCTTAAAGTCATTGATCTTGGTGGACTGATTGGACTTGCTGGGACTATACCACCCATGATTGGTTTCCACCTTCCAAAACTTGAAAAGCTCTACCTCTATGGTAACAATCTAAGTGGGCCAATACCAGAAAGCATTGGCAGATTGTCCCAACTCCAAGAATTAGTACTTCATGAGAACAAGTTATCTGGGTGCATTCCTGCTAGCCTTGGCATGATGAAGAATCTCAGAAGGATGCTGCTTTATTCAAATCAATTCTCAGGTACCATACCTAATTCACTAACAAATCTGACACTATTGGTAGAATTGGATCTTCATAGTAATGGTTTAACTGGTCATATACCTACTGCAATTGGTCAGCTACGGTGTTTGGAAAAGCTTGACCTTTCAGACAATAAGGTAAGTGGGAAACTACCTGATTCACTAACTAACTTAACTGCCATTTCAGTTATGTACTTAGATACTAACTACCTTGATGGGGCGGTCCCATTTCCATCAAAGTCAGGTGACATGCCTTGTCTAGGATTCCTAAGACTCCATGATAATTGTCTGAGAGGAAATATACCTTCCAACTTTGGAAATCTGGTTTCCCTTCAGAGACTTGCTTTGGCAAACAACAAGCTTGAAGGACATATACCTTCGAGTTTGGGTGATCTTTCATCTTTGACAGAGCTATACCTTGACGGAAACCTCTTATCTGGTCAGATACCAAAATCAATTGGACAACTCTCTCAGCTCATAACGTTCACAATCTCCAGCAATCTCATTCAAGGGCCATTACCTACAGAGATGTCTTCCCTTCACAATCTTCAAACAATTGAACTTTCATTCAACCCTTTAAACCTCACAGCCATTCCACATTGGCTAGCAGAACTGCCATCTCTTTCAAGGATTCACTTAGCCGGAAGTGGATTGAACGGTGAAATTCCTGAATTTTTTAGGGCAACCCCTAGTCCATTACAGGAATTGGACTTATCAGATAACCAACTTTCTGGTAGCATTCCAGCTTGGCTTGGAAGCCTCAGTCAGCTTTACTCTTTAAATCTTTCAAGGAACGCACTGGTTTCAGAAATACCGGATTCGCTGACTAACTTACATGATCTTGGTGTTCTTGATCTTCACTCCAATAAATTGACAGGCTCCATAAGTAAGGTGTTTCATATGGGGGGTTCCCTCAGATTTATTGATCTTTCTGATAACAACTTCTCGAGTGACATTGAAGAAATTGGTGCAGGAGAACAGAATGAGATTCAGTTTCTAAATTTATCACACAATTTCTTAGGAGGCAGATTACCAAGTTCAGTAGCAAGATTGCAAGAATTACATTATTTGGATTTGAGCCACAACAAGTTAGGCTCCACCTTGCCTGTGATGCTAGCAGGCGTGAGCACTTTGGAGATATTGAAGCTACAGAAGAACTACTTTACTGGTAATATACCCGAAGAATATTTGAAGCTGATAAAGCTTAAGGAGTTGGATTTATCAAGCAATATGCTTGAAGGTGAAATCCCACAAGGTGAACCTCTCATGGATTTTCCCAAGAGCTCTTTCTATGGAAACAAGGGACTATGTGGGAAGCCTCTAACTCCCTGCAGCCCTTGA 1923 0.4103 MGFQLLWLFVMFATVSFGEEDKIAEGCSPDDLKGLLSFRNDIHIDTSGRLAKWVGHNCCSWEGIVCENITNNNRVIEIHLPGFISNDEFLYQSQMTGWLSPSITLITALKVIDLGGLIGLAGTIPPMIGFHLPKLEKLYLYGNNLSGPIPESIGRLSQLQELVLHENKLSGCIPASLGMMKNLRRMLLYSNQFSGTIPNSLTNLTLLVELDLHSNGLTGHIPTAIGQLRCLEKLDLSDNKVSGKLPDSLTNLTAISVMYLDTNYLDGAVPFPSKSGDMPCLGFLRLHDNCLRGNIPSNFGNLVSLQRLALANNKLEGHIPSSLGDLSSLTELYLDGNLLSGQIPKSIGQLSQLITFTISSNLIQGPLPTEMSSLHNLQTIELSFNPLNLTAIPHWLAELPSLSRIHLAGSGLNGEIPEFFRATPSPLQELDLSDNQLSGSIPAWLGSLSQLYSLNLSRNALVSEIPDSLTNLHDLGVLDLHSNKLTGSISKVFHMGGSLRFIDLSDNNFSSDIEEIGAGEQNEIQFLNLSHNFLGGRLPSSVARLQELHYLDLSHNKLGSTLPVMLAGVSTLEILKLQKNYFTGNIPEEYLKLIKLKELDLSSNMLEGEIPQGEPLMDFPKSSFYGNKGLCGKPLTPCSP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01202 640 FunFam Nuclear pore complex protein NUP107 28 197 - -
Pte12g01202 640 PANTHER UNNAMED PRODUCT 90 513 - -
Pte12g01202 640 PRINTS Leucine-rich repeat signature 427 440 - -
Pte12g01202 640 PRINTS Leucine-rich repeat signature 545 558 - -
Pte12g01202 640 ProSiteProfiles Leucine-rich repeat profile. 595 617 IPR001611 GO:0005515
Pte12g01202 640 Gene3D Ribonuclease Inhibitor 271 356 IPR032675 -
Pte12g01202 640 SMART LRR_typ_2 326 350 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 132 156 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 545 568 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 593 617 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 472 495 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 302 325 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 374 399 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 204 228 IPR003591 -
Pte12g01202 640 SMART LRR_typ_2 448 471 IPR003591 -
Pte12g01202 640 FunFam Leucine-rich repeat receptor protein kinase EMS1 198 274 - -
Pte12g01202 640 Gene3D Ribonuclease Inhibitor 26 270 IPR032675 -
Pte12g01202 640 Pfam Leucine rich repeat 133 193 IPR001611 GO:0005515
Pte12g01202 640 Pfam Leucine rich repeat 284 339 IPR001611 GO:0005515
Pte12g01202 640 Pfam Leucine rich repeat 450 509 IPR001611 GO:0005515
Pte12g01202 640 Pfam Leucine rich repeat 207 265 IPR001611 GO:0005515
Pte12g01202 640 Gene3D Ribonuclease Inhibitor 357 640 IPR032675 -
Pte12g01202 640 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 367 640 - -
Pte12g01202 640 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 275 366 - -
Pte12g01202 640 SUPERFAMILY L domain-like 206 626 - -
Pte12g01202 640 SUPERFAMILY L domain-like 27 293 - -
Pte12g01202 640 SMART LRR_sd22_2 593 618 - -
Pte12g01202 640 SMART LRR_sd22_2 326 352 - -
Pte12g01202 640 SMART LRR_sd22_2 132 158 - -
Pte12g01202 640 SMART LRR_sd22_2 228 254 - -
Pte12g01202 640 SMART LRR_sd22_2 424 439 - -
Pte12g01202 640 SMART LRR_sd22_2 374 391 - -
Pte12g01202 640 SMART LRR_sd22_2 545 571 - -
Pte12g01202 640 Pfam Leucine Rich Repeat 427 448 IPR001611 GO:0005515
Pte12g01202 640 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g01202 4 639 Receptor kinase-like Gene Family AT4G08850 32.452 3.42e-94 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01202 - - jre:108989821 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01202 12 33066694 33068830 Pte12g01202 12 33066694 33068830 RCT