Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01199 ATGGGAATGGAGTTCTTCAGCAAAACTAAGGTGGTGAAGCTCCGAAGCCACCTTGACAAGTACTTAGTTGCGGATGACGATCTTGAAACGGTTCGTCAGAGTCGAAATGGTTCGTCGAGAAAAGCGATATGGGTGGTGGAATTCGTTGAAGAGAAAAGTCGTTGCATTAGACTCAAGAGCTGCCATGGCAGGTACCTTACAGCAACGGAGACATCGTTTCTGCTTGGTGTGACTGGGAACAGAGTGCAGCAGAGTGATTTTCAAAAGGGTCTGAGTTGGAAACACGATTGGGAGCCAATAAGAGATGGGTTTGAAGTGAAGCTCAAGAGTTGGTGCGGGACTTGTTTGAGAGCCAATGGAGCTACACCGCCATGGAGGAATTCGATCACACATGATGAACCACAGAGCTCGGCAACTCAGAATTGGACTTTGTGGGATGTAGAGGCAGTGCAAGTTGAAGGTGGTTTTGAATTTCAGACACAGAGTCAGAGTGGAGAATGGTCCTATCAAACAAGCTCGTCTTCCATGGTGTCAGATGAGGTTTTGGGGTCAGAACCAAACTCTCCCATGTCAGTCTTTGGAATCAAGTCTCCCAGATTCAACTCAAAGTTTAAGGTGAGTTCAAACACCAACGGCTACAACTACAACACGGGCATGGACTTTTTCCATAACGCAAAGGCTGTAAGGCTAAGGGGTCACCATGACAAGTACCTCTTGGCTGAAGAAGATGAAGAGGGTGTTGAGCAAGATCGGAAAGGATCTTCCAGAAACGCGAGATGGGTTGTTGAATTCGTGCCTGGATTTGATAATTTGATCCGACTTAAGAGCTGCTATGGCAAGTACCTTACAGCGTCTAACCAGCCATTTTTGCTCGGTATGACTGGTCGTAAGGTGCTGCAAACTCTGCCCAGAAGGCTCGACTCCTCTGTGGAATGGGAACCCGTCAGAGAGGGAAAGAAGATCAAGTTGAGAACTCGGTATGGCAATTTCTTGAGGGCGAATGGTGGTTTGCCTCCGTGGAGGAACTCAGTCACGCATGATATCCCACATAGGACATCCAGCCAAGATTGGATCTTGTGGGATATGGATGTGATTGAGATTGAGGTTAGTAGGTCTCCTGGTCAGAAACCGACAGTGCCACCAGCTGTTCCTCACTCAGATTCTCTAGATTTCGGTTCCAGCTCACCACCTTCATTTTCTGCCAAATCTGATAACTTTTCCAGACAAGAGTCTACGGACTCCATTGTGCCTGCACCACCAAAATACGCTGAGGGAAGGGTTATGTACTATCATATAGCTGAAGATAATGGGGATGTGGATGATGATGTTGTTCAAGGTTACTCTTTCACTTTCAAAGGCAATGGCGTTGAGGAATTGAAGAGAAAGCTGGAAGAGGAGACAGGGCTAGAGGATATAATCGTTTGTTCAAGAAGTCCCCTCAATGCAAAGCTTTATCCTCTTCGATTGCAGCTTCCACCCAATAATGTCAGCATGCATGTCATTTTGGTTTTACCAGAGTCAAAAGTGGCAAGAGACTTTGAGAAACAAGGTTTACTGTAA 1560 0.4641 MGMEFFSKTKVVKLRSHLDKYLVADDDLETVRQSRNGSSRKAIWVVEFVEEKSRCIRLKSCHGRYLTATETSFLLGVTGNRVQQSDFQKGLSWKHDWEPIRDGFEVKLKSWCGTCLRANGATPPWRNSITHDEPQSSATQNWTLWDVEAVQVEGGFEFQTQSQSGEWSYQTSSSSMVSDEVLGSEPNSPMSVFGIKSPRFNSKFKVSSNTNGYNYNTGMDFFHNAKAVRLRGHHDKYLLAEEDEEGVEQDRKGSSRNARWVVEFVPGFDNLIRLKSCYGKYLTASNQPFLLGMTGRKVLQTLPRRLDSSVEWEPVREGKKIKLRTRYGNFLRANGGLPPWRNSVTHDIPHRTSSQDWILWDMDVIEIEVSRSPGQKPTVPPAVPHSDSLDFGSSSPPSFSAKSDNFSRQESTDSIVPAPPKYAEGRVMYYHIAEDNGDVDDDVVQGYSFTFKGNGVEELKRKLEEETGLEDIIVCSRSPLNAKLYPLRLQLPPNNVSMHVILVLPESKVARDFEKQGLL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01199 519 Gene3D - 7 149 - -
Pte12g01199 519 MobiDBLite consensus disorder prediction 388 414 - -
Pte12g01199 519 FunFam BnaC05g19630D protein 223 363 - -
Pte12g01199 519 MobiDBLite consensus disorder prediction 372 418 - -
Pte12g01199 519 SUPERFAMILY Actin-crosslinking proteins 9 148 IPR008999 -
Pte12g01199 519 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 219 504 - -
Pte12g01199 519 Pfam Domain of unknown function (DUF569) 3 145 IPR007679 -
Pte12g01199 519 Pfam Domain of unknown function (DUF569) 219 360 IPR007679 -
Pte12g01199 519 Gene3D - 227 346 - -
Pte12g01199 519 FunFam BnaC05g19630D protein 7 148 - -
Pte12g01199 519 SUPERFAMILY Actin-crosslinking proteins 223 365 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01199 Pte-Chr12 33037110 33042647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01199 - - tcc:18609298 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01199 12 33037110 33042647 Pte12g01199 12 33037110 33042647 RCT