Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01194 ATGGAAGATGGAGTAGTACGTGTCTATGCAAGTAAAGATGCCTCTGAAGAGCTATTCCCAGTTGCAAGTTCAACACAGTTTTTTACGGATATGCATCACGTTTTGAAAATTATGTCCATCGGGAATGTTCGCACAGCATGTCATCATAGACTTCGGTTTCTGGAGGAGAAATTCCGCCTTCATCTGTTAATAAATGCAGATAAAGAGTTTATTGCTCAGAAAAGTGCACCACATCGTGACTTTTACAATATCAGGAAAGTGGATACACATATTCACCATTCTGCTTGCATGAATCAGAAGCATTTGTTGCGCTTCATAAAGTCAAAGCTACGGAAAGAACCTGATGAGGTTGTCATATTCCGAGATGGGAAGTATATGACACTGAAGGAGGTTTTTGAGAGCTTAGACTTGACGGGGTATGACCTGAATGTTGATTTATTAGACGTTCATGCAGATAAAAGCACCTTCCACCGTTTTGACAAGTTCAACCTTAAGTATAACCCTTGTGGCCAGAGCAGACTCAGAGAGATATTTTTAAAGCAGGATAATCTTATTCAAGGGAGGTTTTTGGCTGAAGTTACAAAACAAGTTCTTTCCGATCTTGAAGCAAGCAAATATCAGATGGCAGAGTATAGGATTTCTATATATGGGAGGAAACAGAGTGAATGGGACCAGCTGGCGAGTTGGTTTGTTAACAATGCTATCTACAGTGAGAATGCTGTGTGGTTAATCCAGTTACCACGGCTATACAATGTGTACAAGAATATGGGAATTGTTAATTCATTCCAGAATATTTTGGATAACGTGTTTATTCCTCTATTTGAGGCCACAGTAGATCCAAATTCTCATCCTCAGTTACATTTATTCCTGATGCAGGTGGTGGGCTTTGACCTTGTAGATGATGAAAGCAAACCTGAAAGACGACCAACCAAGCACATGCCTACTCCGGCTGAATGGACCAATGAATTCAATCCAGCGTACTCATATTATGCTTATTACTGCTACGCAAATCTGTATACACTGAATAAGCTTCGTGAATCTAAAGGATTGCCAACAATTAGATTTCGACCTCACTGTGGAGAGACAGGTGATGTTGACCATTTGGCTGCTGCCTTCCTTGTATGTCATAACATTTCCCATGGAATCAATCTGCGAAAATCTCCTGTATTGCAATATTTATATTACCTTGCACAGGTTGGATTGGCCTTGTCACCCCTAAGCAATAATTCACTCTTCCTAGATTACCATCGAAACCCGTTTCCCGTGTTTTTCCAGCGAGGACTAAATGTTTCTCTCTCAAGTGATGATCCTTTGCAAATCCATTTGACAAAAGAAGCACTGCTCGAAGAATATAGTGTAGCATCACAGGTATGGAAGCTTAGCGCTTGTGATCTCTGTGAGATAGCTCGAAATTCTGTTTACCAGTCTGGGTTTTCACATGCAATAAAGTTACACTGGCTAGGGGACAAATATTTTGTCAGTGGCCCTGAAGGAAATGATATCCATAAGACAAATGTTCCGCATATGAGGATCGCCTTTCGCTACGAGACATGGAAGGAAGAGATGCAGTGTGTATACTCGGGCAAAGCAACCTTTCCTGAATACGTAGATCCATGA 1617 0.4094 MEDGVVRVYASKDASEELFPVASSTQFFTDMHHVLKIMSIGNVRTACHHRLRFLEEKFRLHLLINADKEFIAQKSAPHRDFYNIRKVDTHIHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLSDLEASKYQMAEYRISIYGRKQSEWDQLASWFVNNAIYSENAVWLIQLPRLYNVYKNMGIVNSFQNILDNVFIPLFEATVDPNSHPQLHLFLMQVVGFDLVDDESKPERRPTKHMPTPAEWTNEFNPAYSYYAYYCYANLYTLNKLRESKGLPTIRFRPHCGETGDVDHLAAAFLVCHNISHGINLRKSPVLQYLYYLAQVGLALSPLSNNSLFLDYHRNPFPVFFQRGLNVSLSSDDPLQIHLTKEALLEEYSVASQVWKLSACDLCEIARNSVYQSGFSHAIKLHWLGDKYFVSGPEGNDIHKTNVPHMRIAFRYETWKEEMQCVYSGKATFPEYVDP* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01194 538 ProSitePatterns Adenosine and AMP deaminase signature. 431 437 IPR006650 GO:0009168|GO:0019239
Pte12g01194 538 NCBIfam AMP deaminase 1 524 IPR006329 GO:0003876|GO:0032264
Pte12g01194 538 FunFam AMP deaminase 97 187 - -
Pte12g01194 538 Pfam AMP deaminase 1 525 IPR006329 GO:0003876|GO:0032264
Pte12g01194 538 PIRSF AMP_deaminase 1 532 IPR006329 GO:0003876|GO:0032264
Pte12g01194 538 Gene3D - 97 187 - -
Pte12g01194 538 Gene3D - 1 521 - -
Pte12g01194 538 SUPERFAMILY Metallo-dependent hydrolases 1 523 IPR032466 -
Pte12g01194 538 CDD AMPD 27 522 IPR006329 GO:0003876|GO:0032264
Pte12g01194 538 FunFam Probable amp deaminase 173 521 - -
Pte12g01194 538 PANTHER AMP DEAMINASE 1 529 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01194 Pte-Chr12 32332698 32337009 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01194 K01490 - qsa:O6P43_025400 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01194 12 32332698 32337009 Pte12g01194 12 32332698 32337009 RCT